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Publications

The USGS publishes peer-reviewed reports and journal articles which are used by Chesapeake Bay Program resource managers and policy makers to make science-based decisions for ecosystem conservation and restoration. Use the Search box below to find publications on selected topics.

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Filter Total Items: 899

Modified QuEChERS extraction for the analysis of young-of-year smallmouth bass using GC × GC-TOFMS

Signs of disease, such as external lesions, have been prevalent in smallmouth bass throughout the Susquehanna River Basin, USA. Previous targeted chemical studies in this system have identified known persistent organic pollutants, but a common explanatory link across multiple affected sites remains undetermined. A fast and robust extraction method that can be applied to young-of-year fish is neede
Authors
Paige Teehan, Megan K. Schall, Vicki S. Blazer, Beate Gruber, Frank L Dorman

Hyperpigmented melanistic skin lesions of smallmouth bass Micropterus dolomieu from the Chesapeake Bay watershed

Hyperpigmented melanistic skin lesions (HPMLs) of smallmouth bass Micropterus dolomieu are observed in the Potomac and Susquehanna rivers, Chesapeake Bay watershed, USA. Routine, nonlethal population surveys were conducted at 8 sites on the mainstem Susquehanna River and 9 on the Juniata River, a tributary of the Susquehanna River, between 2012 and 2018, and the prevalence of HPMLs was documented.
Authors
Vicki S. Blazer, Kelsey T. Young, Geoffrey D. Smith, Adam Sperry, Luke R. Iwanowicz

Factors driving nutrient trends in streams of the Chesapeake Bay watershed

Despite decades of effort toward reducing nitrogen and phosphorus flux to Chesapeake Bay, water-quality and ecological responses in surface waters have been mixed. Recent research, however, provides useful insight into multiple factors complicating the understanding of nutrient trends in bay tributaries, which we review in this paper, as we approach a 2025 total maximum daily load (TMDL) managemen
Authors
Scott Ator, Joel Blomquist, James S. Webber, Jeffrey G. Chanat

Comparison of underwater video with electrofishing and dive‐counts for stream fish abundance estimation

Advances in video technology enable new strategies for stream fish research. We compared juvenile (age‐0) and adult (age 1+) Brook Trout Salvelinus fontinalis abundance estimates from underwater video with backpack electrofishing and dive‐count methods across a series of stream pools in Shenandoah National Park, Virginia (n = 41). Video methods estimated greater mean abundance of adult trout than
Authors
Nathaniel P. Hitt, Karli M Rogers, Craig D. Snyder, C. Andrew Dolloff

Effects of legacy sediment removal and effects on nutrients and sediment in Big Spring Run, Lancaster County, Pennsylvania, 2009–15

Big Spring Run is a 1.68-square mile watershed underlain by mostly carbonate rock in a mixed land-use setting (part agricultural and part developed) in Lancaster County, Pennsylvania. Big Spring Run is a subwatershed of Mill Creek, a tributary to the Conestoga River. These watersheds are known contributors of nutrient and sediment loads to the Chesapeake Bay and several stream reaches are on the P
Authors
Michael J. Langland, Joseph W. Duris, Tammy M. Zimmerman, Jeffrey J. Chaplin

Draft genome of an adomavirus associated with raised mucoid skin lesions on smallmouth bass (Micropterus dolomieu)

Raised mucoid skin lesions have been observed on smallmouth bass (Micropterus dolomieu) for years. Here we report a draft genome of a novel adomavirus (Micropterus dolomieu adomavirus 2) associated with this disease. The circular genome is 17,561 bp and most similar to that of alpha-Adomaviruses.
Authors
Luke Iwanowicz, Kelsey T. Young, Cynthia R. Adams, Vicki S. Blazer, Geoffrey Smith, Robert S. Cornman

Mercury bioaccumulation in freshwater fishes of the Chesapeake Bay watershed

Chemical contaminants are a threat to the Chesapeake Bay watershed, with mercury (Hg) among the most prevalent causes of impairment. Despite this, large-scale patterns of Hg concentrations, and the potential risks to fish, wildlife, and humans across the watershed, are poorly understood. We compiled fish Hg data from state monitoring programs and recent research efforts to address this knowledge g
Authors
James Willacker, Collin Eagles-Smith, Vicki S. Blazer

Sediment and chemical contaminant loads in tributaries to the Anacostia River, Washington, District of Columbia, 2016–17

A study was conducted by the U.S. Geological Survey (USGS) in cooperation with the Washington, D.C., Department of Energy & Environment to estimate the loads of suspended-sediment-bound chemical compounds in five gaged tributaries and four ungaged tributaries of the Anacostia River (known locally as “Lower Anacostia River”) in Washington, D.C. Tributaries whose discharge is measured by the USGS ar
Authors
Timothy P. Wilson

Spatial and temporal trends in Potomac River fish abundance linked to species traits

Analysis of species abundance trends can inform an understanding of the underlying mechanisms. We evaluated spatial and temporal trends in fish species abundance in the non-tidal Potomac River (USA) from a dataset comprising 2841 seine-hauls with > 250,000 individual fish records across 10 sites and 43 years (1975-2017). The dataset contained 47 species from 7 taxonomic families, with species rich
Authors
Nathaniel P. Hitt, Karli Rogers, Zachary A. Kelly, Josh Henesy, John E. Mullican

Disentangling the potential effects of land-use and climate change on stream conditions

Land‐use and climate change are significantly affecting stream ecosystems, yet understanding of their long‐term impacts is hindered by the few studies that have simultaneously investigated their interaction and high variability among future projections. We modeled possible effects of a suite of 2030, 2060, and 2090 land‐use and climate scenarios on the condition of 70,772 small streams in the Ches
Authors
Kelly O. Maloney, Kevin P. Krause, Claire Buchanan, Lauren Hay, Gregory J. McCabe, Zachary M. Smith, Terry L. Sohl, John A. Young

Patterns of denitrification potential in tidal freshwater forested wetlands

Limited evidence for spatial patterns of denitrification in tidal freshwater forested wetlands (TFFWs), seemingly due to high spatial variability in the process, is surprising considering the various spatial gradients of its biogeochemical and hydrogeomorphic controls in these ecosystems. Because certain physical environmental gradients may be useful for the prediction of denitrification in TFFWs,
Authors
Alicia R. Korol, Gregory B. Noe

A comparison of hydrocarbon-related landscape disturbance patterns along the New York-Pennsylvania border, 2004–2013

Executive SummaryThe New York-Pennsylvania area has a long history of hydrocarbon extraction, and the addition of shale gas extraction methods contributes to landscape disturbance borne by previously developed oil and non-shale gas resources. The main unconventional extraction method used to extract shale gas from the Marcellus Shale located in New York and Pennsylvania is hydraulic fracturing, or
Authors
Coral M. Roig-Silva, Lesley E. Milheim, E. Terrence Slonecker, Siddiq Kalaly, Joseph Chestnut