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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41620

Range-wide genetic analysis of an endangered bumble bee (Bombus affinis, Hymenoptera: Apidae) reveals population structure, isolation by distance, and low colony abundance

Declines in bumble bee species range and abundances are documented across multiple continents and have prompted the need for research to aid species recovery and conservation. The rusty patched bumble bee (Bombus affinis) is the first federally listed bumble bee species in North America. We conducted a range-wide population genetics study of B. affinis from across all extant conservation units to
Authors
John Mola, Ian Pearse, Michelle Boone, Elaine Evans, Mark Hepner, Robert Jean, Jade Kochanski, Cade Nordmeyer, Eric Runquist, Tamara A. Smith, Jaime Strange, Jay Watson, Jonathan B Koch

Vegetation, fuels, and fire-behavior responses to linear fuel-break treatments in and around burned sagebrush steppe: Are we breaking the grass-fire cycle?

BackgroundLinear fuel breaks are being implemented to moderate fire behavior and improve wildfire containment in semiarid landscapes such as the sagebrush steppe of North America, where extensive losses in perennial vegetation and ecosystem functioning are resulting from invasion by exotic annual grasses (EAGs) that foster large and recurrent wildfires. However, fuel-break construction can also po
Authors
Matthew Germino, Samuel J. Price, Susan J Prichard

Comparing modern identification methods for wild bees: Metabarcoding and image-based morphological taxonomic assignment

With the decline of bee populations worldwide, studies determining current wild bee distributions and diversity are increasingly important. Wild bee identification is often completed by experienced taxonomists or by genetic analysis. The current study was designed to compare two methods of identification including: (1) morphological identification by experienced taxonomists using images of field-c
Authors
Cassandra Smith, Robert S. Cornman, Jennifer A. Fike, Johanna M. Kraus, Sara J. Oyler-McCance, Carrie E Givens, Michelle Hladik, Mark W. Vandever, Dana W. Kolpin, Kelly Smalling

Nontarget effects of pre-emergent herbicides and a bioherbicide on soil resources, processes, and communities

Community-type conversions, such as replacement of perennials by exotic annual grasses in semiarid desert communities, are occurring due to plant invasions that often create positive plant–soil feedbacks, which favor invaders and make restoration of native perennials difficult. Exotic annual grass control measures, such as pre-emergent herbicides, can also alter soil ecosystems directly or indirec
Authors
Brynne E. Lazarus, Matthew Germino, Marie-Anne de Graaff

Fishes move to transient local refuges, not persistent landscape refuges during river drying experiment

Anthropogenically driven flow intermittency is increasing in freshwater streams, with important implications for the management and conservation of aquatic ecosystems. Because most freshwater fishes are mobile, they are expected to emigrate from intermittent reaches, but this may not be true in streams transitioning from perennial to intermittent. Here, we attempt to determine if riverine fishes v
Authors
Thomas P Archdeacon, Eric J. Gonzales, Charles Yackulic

Cross-scale analysis reveals interacting predictors of annual and perennial cover in Northern Great Basin rangelands

Exotic annual grass invasion is a widespread threat to the integrity of sagebrush ecosystems in Western North America. Although many predictors of annual grass prevalence and native perennial vegetation have been identified, there remains substantial uncertainty about how regional-scale and local-scale predictors interact to determine vegetation heterogeneity, and how associations between vegetati
Authors
Madelon Florence Case, Kirk W. Davies, Chad S. Boyd, Lina Aoyama, Joanna Merson, Calvin Penkauskas, Lauren M. Hallett

The roles of diet and habitat use in pesticide bioaccumulation by juvenile Chinook Salmon: Insights from stable isotopes and fatty acid biomarkers

Stable isotopes (SI) and fatty acid (FA) biomarkers can provide insights regarding trophic pathways and habitats associated with contaminant bioaccumulation. We assessed relationships between SI and FA biomarkers and published data on concentrations of two pesticides [dichlorodiphenyltrichloroethane and degradation products (DDX) and bifenthrin] in juvenile Chinook Salmon (Oncorhynchus tshawytscha
Authors
Sara E. Anzalone, Neil W. Fuller, Kara E. Huff Hartz, Gregory W. Whitledge, Jason Tyler Magnuson, Daniel Schlenk, Shawn Acuña, Matt R. Whiles, Michael J. Lydy

Genetic Connectivity in the Arizona toad (Anaxyrus microscaphus): implications for conservation of a stream dwelling amphibian in the arid Southwestern U.S.

The Arizona Toad (Anaxyrus microscaphus) is restricted to riverine corridors and adjacent uplands in the arid southwestern United States. As with numerous amphibians worldwide, populations are declining and face various known or suspected threats, from disease to habitat modification resulting from climate change. The Arizona Toad has been petitioned to be listed under the U.S. Endangered Species
Authors
Sara J. Oyler-McCance, Mason J. Ryan, Brian K. Sullivan, Jennifer A. Fike, Robert S. Cornman, J. T. Giermakowski, Shawna J Zimmerman, R. L. Harrow, S.J. Hedwell, Blake R. Hossack, I. M. Latella, R. E. Lovish, S. Siefken, Brent H. Sigafus, Erin L. Muths

How diverse is the toolbox? A review of management actions to conserve or restore coregonines

Over the past centuries, coregonines have been exposed to a range of stressors that have led to extinctions, extirpations, and speciation reversals. Given that some populations remain at risk and fishery managers have begun restoring coregonines where they have been extirpated, we reviewed the primary and gray literature to describe the diversity of coregonine restoration or conservation actions t
Authors
David Bunnell, Orlane Anneville, Jan Baer, Colin Bean, Kimmo Kahlilainen, Alfred Sandstrom, Oliver Selz, Pascal Vonlanthen, Josef Wanzenbock, Brian C. Weidel

The Metzger marsh restoration: A vegetation-centric look after 27 years

We investigated wetland vegetation before, during, and after dike construction at the Metzger Marsh project in western Lake Erie, which was designed to restore a 300-ha wetland that had been degraded following the loss of a protective barrier beach. A dike was constructed in 1995 to replace the function of the eroded barrier beach, but it contained a water-control structure to allow managed hydrol
Authors
Douglas A. Wilcox, Kurt P. Kowalski, Alexandra (Sasha) A Bozimowski

Controls on in-stream nitrogen loss in western Lake Erie tributaries

Management efforts to reduce cyanobacterial harmful algal blooms (cHABs) in the Great Lakes have focused on decreasing tributary inputs of phosphorus (P). Recent research has indicated that reduction of both P and nitrogen (N) can lessen cHABs severity. Microbially mediated N cycling in streambed sediment may reduce N riverine loads, yet little is known about in-stream N processing rates in the Ma
Authors
Rebecca Kreiling, Lynn A. Bartsch, Patrik Mathis Perner, Kenna Jean Breckner, Tanja N. Williamson, James M. Hood, Nathan F. Manning, Laura T. Johnson

Establishment of terrestrial mammals on former reservoir beds following large dam removal on the Elwha River, Washington, USA

Terrestrial wildlife species are important yet often overlooked taxa in the recovery of ecosystems following dam removal. Their presence can shape ecosystem recovery, signal restoration of ecosystem function, and influence food web dynamics and nutrient transfer. We used camera traps to examine seasonal use of two former reservoir beds and an upstream reference reach by the mammalian community fol
Authors
Rebecca McCaffery, Sara Cendejas-Zarelli, Katy R Goodwin, Patricia J. Happe, Kurt Jenkins, Kimberly A. Sager-Fradkin