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Publications

Find out more about Species Management Research Program through our publications. Browse the entire list below or by specific topics at the links below.

Filter Total Items: 653

Potential effects of energy development on environmental resources of the Williston Basin in Montana, North Dakota, and South Dakota

About this volumeThe Williston Basin, which includes parts of Montana, North Dakota, and South Dakota in the United States, has been a leading domestic oil and gas producing area. To better understand the potential effects of energy development on environmental resources in the Williston Basin, the U.S. Geological Survey, in cooperation with the Bureau of Land Management, and in support of the nee

Social effects of rabies infection in male vampire bats (Desmodus rotundus)

Rabies virus (RABV) transmitted by the common vampire bat (Desmodus rotundus) poses a threat to agricultural development and public health throughout the Neotropics. The ecology and evolution of rabies host-pathogen dynamics are influenced by two infection-induced behavioral changes. RABV-infected hosts often exhibit increased aggression which facilitates transmission, and rabies also leads to red
Authors
Elsa M. Cárdenas-Canales, Sebastian Stockmaier, Eleanor Cronin, Tonie E. Rocke, Jorge E. Osorio, Gerald G. Carter

Little bugs, big data, and Colorado River adaptive management: Preliminary findings from the ongoing bug flow experiment at Glen Canyon Dam

The undammed Colorado River in Grand Canyon was characterized by spring snow-melt floods that sometimes exceeded 100,000 cubic feet per second (cfs). These were followed by occasional flash floods during summer monsoons, then by low flows from fall through early spring (Figure 1; Topping and others, 2003). This seasonally variable flow regime carried huge loads of sediment and was an important dri
Authors
Theodore Kennedy, Anya Metcalfe, Bridget Deemer, Morgan Ford, Cheyenne Maxime Szydlo, Charles Yackulic, Jeffrey Muehlbauer

Morbidity and mortality of Hawaiin geese (Branta sandvicensis) and Laysan albatross (Phoebastria immutabilis) associated with reticuloendotheliosis virus

Only one virus, Avipox, has been documented previously in wild birds in Hawaii. Using immunohistochemistry and PCR, we found that two native threatened Hawaiian Geese (Branta sandvicensis), one with multicentric histiocytoma and the other with toxoplasmosis, and one Laysan Albatross (Phoebastria immutabilis) with avian pox were infected with reticuloendotheliosis virus (REV). The virus was isolate
Authors
Thierry M. Work, Renee Breeden, Julie Dagenais, Robert Rameyer, Holly Sellers, Hon S. Ip, James W. Casey

A phylogeny based on cytochrome-c oxidase gene sequences identifies sympatric Ichthyophonus genotypes in the NE Pacific Ocean

ABSTRACT: In recent decades, evidence has accumulated to suggest that the widespread and highly variable parasite Ichthyophonus hoferi is actually a species complex. Highly plastic morphology and a general lack of defining structures has contributed to the likely underestimate of biodiversity within this group. Molecular methods are a logical next step in the description of these parasites, but ma
Authors
Jacob L. Gregg, Paul Hershberger, Abigail S. Neat, Hiruni T. Jayasekera, Jayde A. Ferguson, Rachel L. Powers, Maureen K. Purcell

Rapid diagnostic test to detect and discriminate infectious hematopoietic necrosis virus (IHNV) genogroups U and M to aid management of Pacific Northwest salmonid populations

Infectious hematopoietic necrosis virus (IHNV) is an acute pathogen of salmonids in North America, Europe, and Asia that is phylogenetically classified into five major virus genogroups (U, M, L, E, and J). The geographic range of the U and M genogroup isolates overlap in the North American Columbia River Basin and Washington Coast region, where these genogroups pose different risks depending on th
Authors
William N. Batts, Tony R. Capps, Lisa M. Crosson, Rachel L. Powers, Rachel Breyta, Maureen K. Purcell

Potential effects of sea level rise on nearshore habitat availability for surf smelt (Hypomesus pretiosus) and eelgrass (Zostera marina), Puget Sound, Washington

In this study we examine the potential effects of three predicted sea level rise (SLR) scenarios on the nearshore eelgrass (Zostera marina L.) and surf smelt (Hypomesus pretiosus) spawning habitats along a beach on Bainbridge Island, Washington. Baseline bathymetric, geomorphological, and biological surveys were conducted to determine the existing conditions at the study site. The results of these
Authors
Collin D. Smith, Theresa L. Liedtke

Statistical assessment on determining local presence of rare bat species

Surveying cryptic, sparsely distributed taxa using autonomous recording units, although cost-effective, provides imperfect knowledge about species presence. Summertime bat acoustic surveys in North America exemplify the challenges with characterizing sources of uncertainty: observation error, inability to census populations, and natural stochastic variation. Statistical uncertainty, if not conside
Authors
Kathryn M. Irvine, Katharine M. Banner, Christian Stratton, W. Mark Ford, Brian Reichert

Monitoring the movements of juvenile Pacific Lamprey (Entosphenus tridentatus) in the Yakima River, Washington, using acoustic telemetry, 2019–20

Anthropogenic barriers to main-stem and tributary passage are one of the primary threats associated with declining populations of Pacific Lamprey (Entosphenus tridentatus) in the Columbia River Basin. Juvenile lamprey are of special interest because their downstream migration to the ocean may be affected by barriers such as dams or water diversions. Telemetry studies that describe the movement and
Authors
Theresa L. Liedtke, Ralph T. Lampman, Patrick Monk, Amy C. Hansen, Tobias J. Kock, Tyler E. Beals, Daniel Z. Deng, Michael S. Porter

Monitoring fish abundance and behavior, using multi-beam acoustic imaging sonar, at a Selective Water Withdrawal structure in Lake Billy Chinook, Deschutes River, Oregon, 2020

Collection of juvenile salmonids at Round Butte Dam is a critical part of the effort to enhance populations of anadromous fish species in the upper Deschutes River because fish that are not collected at the dam may either incur increased mortality during dam passage or remain landlocked and lost to the anadromous fish population. Adaptive resolution imaging sonar systems were used to assess the be
Authors
Collin D. Smith, Tyson W. Hatton, Noah S. Adams

Risk assessment for bull trout introduction into Sullivan Lake and Harvey Creek, northeastern Washington

The Kalispel Tribe of Indians (KT), U. S. Fish and Wildlife Service, and Washington Department of Fish and Wildlife are engaged in conservation of bull trout (Salvelinus confluentus) in the Lake Pend Oreille (LPO) Core Area. The LPO is a complex habitat core area which falls within three states (Montana, Idaho, and Washington) and a tribal entity. As part of the conservation process, KT worked in
Authors
Jill M. Hardiman, Rachel B. Breyta, Carl O. Ostberg

Distribution of bull trout (Salvelinus confluentus) in conjunction with habitat and trout assemblages in creeks within the Klamath Basin, Oregon 2010–16

Bull trout (Salvelinus confluentus) in the Klamath Basin are on the southernmost border of the range of the species, where threats are most severe and where bull trout are most imperiled. In their recovery plan the U.S. Fish and Wildlife Service (2015, https://ecos.fws.gov/ecp/report/species-with-recovery-plans) suggested that Klamath Basin bull trout are at increased risk of extirpation due to ha
Authors
Barbara A. Martin, Nolan Banish, David A. Hewitt, Brian S. Hayes, Amari Dolan-Caret, Alta C. Harris, Caylen Kelsey