Fish and Aquatic Species Publications

Piscine orthoreovirus (PRV-1) is a segmented RNA virus which is commonly found in salmonids in the Atlantic and Pacific Oceans. PRV-1 causes the Heart and Skeletal Muscle Inflammation (HSMI) disease in Atlantic salmon and is associated with several other disease conditions. Previous phylogenetic studies of genome segment 1 (S1) identified four main genogroups of PRV-1 (S1 genogroups I – IV). The g

This document describes a standard operating procedure (SOP) for the preparation of purposely killed juvenile salmon, implanted with telemetry transmitters, to be released into rivers, lakes, or streams to test one of the survival model assumptions. Procedures for releases of purposely killed fish (hereinafter dead fish releases) were developed by staff from the U.S. Geological Survey’s Columbia R

Forage fish are primary prey for seabirds, fish and marine mammals. Elevated levels of pollutants in Puget Sound, Washington salmon and killer whale tissues potentially could be sufficiently high to elicit adverse effects and hamper population recovery efforts. Contaminant transfer and biomagnification of the toxic compounds measured in this study likely contribute to those elevated concentrations

Recovery of salmon populations in the upper Cowlitz River Basin depends on trap-and-haul efforts owing to impassable dams. Therefore, successful recovery depends on the collection of out-migrating juvenile salmon at Cowlitz Falls Dam (CFD) for transport below downstream dams, as well as the collection of adults for transport upstream from the dams. Tacoma Power began downstream fish collection eff

The portion of the Snake River fall Chinook salmon Oncorhynchus tshawytscha evolutionary significant unit (ESU) that spawns upstream of Lower Granite Dam transitioned from low to high abundance during 19922019 in association with U.S. Endangered Species Act recovery efforts and other federally mandated actions. This annual report focuses on (1) numeric and habitat use responses by natural- and hat

Marine and freshwater plastic pollution is a challenging issue receiving large amounts of research and media attention. Yet, few studies have documented the impact of microplastic ingestion to aquatic organisms. In the Pacific Northwest, Chinook salmon are a culturally and commercially significant fish species. The presence of marine and freshwater microplastic pollution is well documented in Chin

Anthropogenic eutrophication contributes to harmful blooms of cyanobacteria in freshwater ecosystems worldwide. In Upper Klamath Lake, Oregon, massive blooms of Aphanizomenon flos-aquae and smaller blooms of other cyanobacteria are associated with cyanotoxins, hypoxia, high pH, high concentrations of ammonia, and potentially hypercapnia. Recovery of the endangered Lost River sucker Deltistes luxat

Executive SummaryNative steelhead (anadromous form of rainbow trout [Oncorhynchus mykiss]) and bridgelip sucker (Catostomus columbianus) were historically used by the Kah-miltpah (Rock Creek) Band for sustenance, trade, and traditional practices in Rock Creek, a tributary to the Columbia River in southeastern Washington State. Rock Creek flows south to the Columbia River at river kilometer (rkm) 3

Executive SummaryA 2-year radiotelemetry study was completed to monitor the movements of adult winter steelhead (Oncorhynchus mykiss) in the upper Cowlitz River Basin. A reintroduction program was established to restore healthy and harvestable populations of steelhead because volitional access to the area was blocked in the 1960s after construction of dams in the lower river. A trap-and-haul progr

Growth during the early marine critical period is positively associated with survival and recruitment for Pacific salmon Oncorhynchus spp., so it is important to understand how certain foraging strategies may bolster growth in estuarine and marine environments. To elucidate how spatiotemporal and demographic differences in diet contribute to growth rate variability, we analyzed stomach contents in

A study was conducted in the lower Yakima River, Washington, during June–October 2019 to evaluate water temperature effects on adult sockeye salmon (Oncorhynchus nerka) behavior. A total of 60 sockeye salmon adults were tagged with radio transmitters and monitored during the study. Fourteen of the fish were collected and tagged at Prosser Dam in late June and the remainder were collected and tagge