Genetics/Bioinformatices

Climate change will expose many species to novel extreme environmental conditions, that may test organisms’ ability to respond to environmental change. Local adaptation, when a species evolves to be more suited for its local environment, can be an indicator of whether a species is likely to persist in the rapidly changing environment. Habitat specialists, like the greater sage-grouse, have evolved...

Widespread anthropogenic development in the sagebrush steppe and shifting climatic patterns have contributed to the observed dramatic declines of the greater sage-grouse since the 1960s. Alteration of the sagebrush habitat can affect many aspects of the species life history, including survival and local resource use. Over many years, the combined effects of landscape composition on these traits...

The greater sage-grouse is a sagebrush-obligate species that has experienced dramatic range-wide declines since the 1960s, causing significant conservation concern. Genetic information has refined our understanding of population structure, the levels of inbreeding or relatedness, allowed the ability to monitor for change over time, and has been used to understand the outcome of management actions...

Sage-grouse, iconic birds of the American West, have experienced dramatic reductions and fragmentation of habitat, resulting in significant conservation concern. Genetic information can help inform priorities for protection and habitat restoration as well as strategies for translocations, but may be difficult for resource managers to find, interpret, and use in their decision making. In this work...

USGS scientists are identifying local adaptation in sage-grouse by modeling allelic variation at large numbers of single-nucleotide polymorphisms (SNPs) in relation to environmental and climate variables.

Using the existing rangewide genetic and demographic data, scientists from the USGS, USDA Forest Service, and University of Waterloo will assess the relative contributions of habitat and genetic connectivity to lek size and stability.

Recent advances in molecular biology allow us to develop and apply the tools and concepts of molecular genetics to the conservation of biological resources. Working with our partners, we design and implement studies that provide genetic and genomic information for a broad range of applications, as detailed below.

Molecular tagging is a new application of molecular genetic techniques to traditional mark-recapture methodology designed to address situations where traditional methods fail. In such studies, non-invasively collected samples (such as feces, feathers, or fur) are used as a source of DNA that is then genotyped at multiple loci such that each individual animal can be uniquely identified. Thus, each...

The use of molecular genetics has become increasingly important in addressing wildlife conservation issues. In the Fort Collins Science Center Molecular Ecology Lab, scientists answer complex questions and conservation issues facing the management of the Nation's fish and wildlife resources. For example, FORT scientists can now locate genes that may contribute to a species' ability to respond to...

This goal of this study is to develop a spatially explicit habitat-population modeling framework to assess the viability of Gunnison Sage-grouse and each of the seven populations (Gunnison Basin and six satellite populations).

The Molecular Ecology Laboratory applies genetic and genomic technologies to address a variety of complex questions and conservation issues facing the management of the Nation's fish and wildlife resources. Together with our partners, we design and implement studies to document genetic diversity and the distribution of genetic variation among individuals, populations, and species. Information from...

Genetic analysis is increasingly used to understand ecosystem processes and inform conservation, management, and policy. I assist USGS researchers and their collaborators in the design, analysis, and interpretation of high-throughput genetic studies. Common applications include: detecting genes responsive to particular environmental stressors in a sentinel species or species of conservation...