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Fish and Aquatic Species Publications

Looking for publications related to fish and aquatic species? Browse the list below or use the search box to narrow the results.

Filter Total Items: 322

A novel approach for directly incorporating disease into fish stock assessment: A case study with seroprevalence data

When estimating mortality from disease with fish population models, common disease surveillance data such as infection prevalence are not always informative, especially for fast-acting diseases that may go unobserved in infrequently sampled populations. In these cases, seroprevalence — the proportion of fish with measurable antibody levels in their blood — may be more informative. In cases of life
Authors
John T. Trochta, Maya Groner, Paul Hershberger, Trevor A. Branch

Behavior of female adult Pacific lamprey (Entosphenus tridentatus) exposed to natural and synthesized odors

Conservation  and management of Pacific Lamprey Entosphenus tridentatus and other imperiled lamprey species could include the use of chemosensory cues to attract or repel migrating adults. For restoration programs, passage of adult lamprey at dams might be improved by using cues to help guide lamprey through fishway entrances. In contrast, odors might repel unwanted invasive Sea Lamprey Petromyzon
Authors
Mike Hayes, Mary L. Moser, Brian J. Burke, Aaron D. Jackson, Nicholas S. Johnson

Factors affecting spatiotemporal variation in survival of endangered winter-run Chinook Salmon outmigrating from the Sacramento River

Among four extant and declining Chinook salmon (Oncorhynchus tshawytscha) runs in California’s Central Valley, none have declined as precipitously as Sacramento River winter-run Chinook Salmon. In addition to habitat loss, migratory winter-run employ a life history strategy to reside and feed in stopover habitats on their way from freshwaters to the ocean. This life history strategy is widely cons
Authors
Jason L. Hassrick, Arnold J. Ammann, Russell Perry, Sara N. John, Miles E. Daniels

Reconnecting the Elwha River: Spatial patterns of fish response to dam removal

The removal of two large dams on the Elwha River was completed in 2014 with a goal of restoring anadromous salmonid populations. Using observations from ongoing field studies, we compiled a timeline of migratory fish passage upstream of each dam. We also used spatially continuous snorkeling surveys in consecutive years before (2007, 2008) and after (2018, 2019) dam removal during summer baseflow t
Authors
Jeffrey J. Duda, Christian E. Torgersen, Samuel J. Brenkman, Roger J. Peters, Kathryn T. Sutton, Heidi A. Connor, Philip R. Kennedy, Stephen C. Corbett, Ethan Z. Welty, Anna Geffre, Josh Geffre, Patrick Crain, Dave Shreffler, John R. McMillan, Mike McHenry, George R. Pess

Growth, survival, and cohort formation of juvenile Lost River (Deltistes luxatus) and shortnose suckers (Chasmistes brevirostris) in Upper Klamath Lake, Oregon, and Clear Lake Reservoir, California—2019 Monitoring Report

Populations of federally endangered Lost River (Deltistes luxatus) and shortnose suckers (Chasmistes brevirostris) in Upper Klamath Lake, Oregon, and Clear Lake Reservoir (hereinafter, Clear Lake), California, are experiencing long-term decreases in abundance. Upper Klamath Lake populations are decreasing not only due to adult mortality, which is relatively low, but also because they are not being
Authors
Ryan J. Bart, Caylen M. Kelsey, Summer M. Burdick, Marshal S. Hoy, Carl O. Ostberg

Synthesis of habitat availability and carrying capacity research to support water management decisions and enhance conditions for Pacific salmon in the Willamette River, Oregon

Flow management is complex in the Willamette River Basin where the U.S. Army Corps of Engineers owns and operates a system of 13 dams and reservoirs (hereinafter Willamette Project), which are spread throughout three large tributaries including the Middle Fork Willamette, McKenzie, and Santiam Rivers. The primary purpose of the Willamette Project is flood-risk management, which provides critical p
Authors
Tobias J. Kock, Russell W. Perry, Gabriel S. Hansen, James White, Laurel E. Stratton Garvin, J. Rose Wallick

From IgZ to IgT: A call for a common nomenclature for immunoglobulin heavy chain genes of ray-finned fish

No abstract available.
Authors
Alex Dornburg, Tatsuya Ota, Michael F. Criscitiello, Irene Salinas, J. Oriol Sunyer, Susana Magadán, Pierre Boudinot, Zhen Xu, Martin F Flajnik, Amy Singer, Francisco Gambón-Deza, John Hansen, Jeffrey A Yoder

Dam removal and river restoration

The removal of dams from rivers has become a common and widespread practice in the United States and Europe. Although often initiated by factors like economics and safety, ecosystem restoration is often a desired benefit and outcome of dam removal. We describe the physical and ecological effects that the placement and removal of dams have on rivers. We then focus on the drivers of dam removal, pre
Authors
Jeffrey J. Duda, J. Ryan Bellmore

Effects of stocking density on stress response and susceptibility to infectious hematopoietic necrosis virus in rainbow trout

The goals of this study were to examine the effect of stocking density on the stress response and disease susceptibility in juvenile rainbow trout (Oncorhynchus mykiss). Fish were sorted into one of 2 stocking densities (high density "HD", 20-40 kg/m3) or (low density, "LD", 4-8 kg/m3) and 3 stress indices (cortisol levels in serum and water, and neutrophil: lymphocyte (N:L) ratios from blood smea
Authors
Jenna J Klug, Piper M Treuting, George E. Sanders, James Winton, Gael Kurath

Behavior and movement of smallmouth bass (Micropterus dolomieu) in the forebay of Bonneville Dam, Columbia River, August–December 2020

A telemetry study was conducted during August–December 2020 to evaluate behavior and movement patterns of adult smallmouth bass (Micropterus dolomieu) in the forebay of Bonneville Dam, Washington. A total of 40 smallmouth bass were collected, tagged, and released during August–September in seven distinct areas of the dam forebay and monitored until mid-December. Movement data from 36 tagged smallm
Authors
Tobias J. Kock, Gabriel S. Hansen, Scott D. Evans

Ontogeny of eDNA shedding during early development in Chinook Salmon (Oncorhynchus tshawytscha)

Knowledge of the timing of major life history events in aquatic species is important for informing conservation and resource management planning. Accordingly, surveys of environmental DNA (eDNA) have been performed to determine the efficacy of eDNA for providing information on life history events, primarily focusing on the timing of events associated with spawning, and these studies have proved su
Authors
Carl Ostberg, Dorothy M. Chase

Avian predation of juvenile Lost River and Shortnose Suckers in Upper Klamath Lake: An assessment of Sucker assisted rearing program releases during 2018–2020

To bolster recruitment in Endangered Species Act (ESA) listed Lost River Suckers (Deltistes luxatus) and Shortnose Suckers (Chasmistes brevirostris) in the Upper Klamath Basin (UKB), the U.S. Fish and Wildlife Service (USFWS) and its partners have implemented the Sucker Assisted Rearing Program (SARP). As part of this program, juvenile suckers were reared in captivity, implanted with passive integ
Authors
Allen Evans, Quinn Payton, Nathan V Banet, Bradley M. Cramer, Caylen Kelsey, David A. Hewitt