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2019

Filter Total Items: 14

Implementing a Grassland Productivity Forecast Tool for the U.S. Southwest

Rangeland systems are some of our nation’s largest providers of agro-ecological services, sustaining plant productivity that is highly variable across seasons and years. Although the ability to predict the upcoming growing season’s rangeland productivity would have enormous economic and management value – such as for making decisions about cattle stocking rates, fire, restoration, and wildlife – t
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Implementing a Grassland Productivity Forecast Tool for the U.S. Southwest

Rangeland systems are some of our nation’s largest providers of agro-ecological services, sustaining plant productivity that is highly variable across seasons and years. Although the ability to predict the upcoming growing season’s rangeland productivity would have enormous economic and management value – such as for making decisions about cattle stocking rates, fire, restoration, and wildlife – t
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Coupling Hydrologic Models with Data Services in an Interoperable Modeling Framework

Computational models are important tools that aid process understanding, hypothesis testing, and data interpretation. The ability to easily couple models from various domains such as, surface-water and groundwater, to form integrated models will aid studies in water resources. This project investigates the use of the Community Surface Dynamics Modeling System (CSDMS) Modeling Framework (CMF) to
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Coupling Hydrologic Models with Data Services in an Interoperable Modeling Framework

Computational models are important tools that aid process understanding, hypothesis testing, and data interpretation. The ability to easily couple models from various domains such as, surface-water and groundwater, to form integrated models will aid studies in water resources. This project investigates the use of the Community Surface Dynamics Modeling System (CSDMS) Modeling Framework (CMF) to
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Building a Roadmap for Making Data FAIR in the U.S. Geological Survey

FAIR is an international set of principles for improving the findability, accessibility, interoperability, and reusability of research data and other digital products. The PIs for this CDI project planned and hosted a workshop of USGS data stakeholders, data professionals, and managers of USGS data systems from across the Bureau’s Mission Areas. Workshop participants shared case studies that foste
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Building a Roadmap for Making Data FAIR in the U.S. Geological Survey

FAIR is an international set of principles for improving the findability, accessibility, interoperability, and reusability of research data and other digital products. The PIs for this CDI project planned and hosted a workshop of USGS data stakeholders, data professionals, and managers of USGS data systems from across the Bureau’s Mission Areas. Workshop participants shared case studies that foste
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A generic web application to visualize and understand movements of tagged animals

The goal of this project was to maximize the value of expensive animal tagging data. We developed an interactive web application to help scientists understand patterns in their own tagging datasets and to help scientists, funders and agencies communicate tagging data to decision-makers and to the general public. Interactive visualizations have emerged recently as a valuable tool for identifying pa
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A generic web application to visualize and understand movements of tagged animals

The goal of this project was to maximize the value of expensive animal tagging data. We developed an interactive web application to help scientists understand patterns in their own tagging datasets and to help scientists, funders and agencies communicate tagging data to decision-makers and to the general public. Interactive visualizations have emerged recently as a valuable tool for identifying pa
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Subsidence Susceptibility Map for the Conterminous U.S.

Sinkholes present hazards to humans due to subsidence and by focusing contaminated surface water runoff into groundwater. Sinkholes create instability in the foundations of buildings, roads and other infrastructure, resulting in damage and in some cases loss of life, but may also play an important role as vernal pools in some ecosystems. This project created a prototype nationwide subsidence susc
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Subsidence Susceptibility Map for the Conterminous U.S.

Sinkholes present hazards to humans due to subsidence and by focusing contaminated surface water runoff into groundwater. Sinkholes create instability in the foundations of buildings, roads and other infrastructure, resulting in damage and in some cases loss of life, but may also play an important role as vernal pools in some ecosystems. This project created a prototype nationwide subsidence susc
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Establishing standards and integrating environmental DNA (eDNA) data into the USGS Nonindigenous Aquatic Species database

Environmental DNA (eDNA) testing allows for high sensitivity monitoring efforts of cryptic species in large, remote systems and is performed by investigating water and soil samples for sloughed DNA. Having access to eDNA datasets across multiple taxa and ecosystems is necessary for improved coordination among researchers and management. Additionally, quality control protocols are needed to vet inc
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Establishing standards and integrating environmental DNA (eDNA) data into the USGS Nonindigenous Aquatic Species database

Environmental DNA (eDNA) testing allows for high sensitivity monitoring efforts of cryptic species in large, remote systems and is performed by investigating water and soil samples for sloughed DNA. Having access to eDNA datasets across multiple taxa and ecosystems is necessary for improved coordination among researchers and management. Additionally, quality control protocols are needed to vet inc
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Serving the U.S. Geological Survey’s geochronological data

Geochronological data provide essential information necessary for understanding the timing of geologic processes and events, as well as quantifying rates and timescales key to geologic mapping, mineral and energy resource and hazard assessments. The USGS’s National Geochronological Database (NGDB) contains over 30,000 radiometric ages, but no formal update has occurred in over 20 years. This proj
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Serving the U.S. Geological Survey’s geochronological data

Geochronological data provide essential information necessary for understanding the timing of geologic processes and events, as well as quantifying rates and timescales key to geologic mapping, mineral and energy resource and hazard assessments. The USGS’s National Geochronological Database (NGDB) contains over 30,000 radiometric ages, but no formal update has occurred in over 20 years. This proj
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Develop Cloud Computing Capability at Streamgages using Amazon Web Services GreenGrass IoT Framework for Camera Image Velocity Gaging

We developed an Internet of Things (IoT) prototype and associated cloud infrastructure for camera-based data collection and initial processing of river streamflow using the cloud (fig. 1). This pilot successfully created a hardware and cloud infrastructure to collect and upload video from a camera gage at San Pedro Creek in San Antonio, Texas. Using a ThingLogix Foundry instance in the Amazon Webs
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Develop Cloud Computing Capability at Streamgages using Amazon Web Services GreenGrass IoT Framework for Camera Image Velocity Gaging

We developed an Internet of Things (IoT) prototype and associated cloud infrastructure for camera-based data collection and initial processing of river streamflow using the cloud (fig. 1). This pilot successfully created a hardware and cloud infrastructure to collect and upload video from a camera gage at San Pedro Creek in San Antonio, Texas. Using a ThingLogix Foundry instance in the Amazon Webs
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High-Resolution, Interagency Biosurveillance of Threatened Surface Waters in the United States

Advances in information technology now provide large volume, high-frequency data collection which may improve real-time biosurveillance and forecasting. But, big data streams present challenges for data management and timely analysis. As a first step in creating a data science pipeline for translating large datasets into meaningful interpretations, we created a cloud-hosted PostgreSQL database tha
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High-Resolution, Interagency Biosurveillance of Threatened Surface Waters in the United States

Advances in information technology now provide large volume, high-frequency data collection which may improve real-time biosurveillance and forecasting. But, big data streams present challenges for data management and timely analysis. As a first step in creating a data science pipeline for translating large datasets into meaningful interpretations, we created a cloud-hosted PostgreSQL database tha
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National Public Screening Tool for Invasive and Non-native Aquatic Species Data

Identifying the leading edge of a biological invasion can be difficult. Many management and research entities have biological samples or surveys that may unknowingly contain data on nonindigenous species. The new Nonindigenous Aquatic Species (NAS) Database automated online tool “SEINeD” (Screen and Evaluate Invasive and Non-native Data) will allow a user to search for these nonindigenous occurren
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National Public Screening Tool for Invasive and Non-native Aquatic Species Data

Identifying the leading edge of a biological invasion can be difficult. Many management and research entities have biological samples or surveys that may unknowingly contain data on nonindigenous species. The new Nonindigenous Aquatic Species (NAS) Database automated online tool “SEINeD” (Screen and Evaluate Invasive and Non-native Data) will allow a user to search for these nonindigenous occurren
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Integrating short-term climate forecast into a restoration management support tool

Natural resources managers are regularly required to make decisions regarding upcoming restoration treatments, often based on little more than business as usual practices. To assist in the decision-making process, we created a tool that predicts site-specific soil moisture and climate for the upcoming year, and provides guidance on whether common restoration activities (i.e. seeding, planting) wil
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Integrating short-term climate forecast into a restoration management support tool

Natural resources managers are regularly required to make decisions regarding upcoming restoration treatments, often based on little more than business as usual practices. To assist in the decision-making process, we created a tool that predicts site-specific soil moisture and climate for the upcoming year, and provides guidance on whether common restoration activities (i.e. seeding, planting) wil
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Transforming Biosurveillance by Standardizing and Serving 40 Years of Wildlife Disease Data

Over the past 40 years the National Wildlife Health center has collected wildlife health information from around the U.S. and beyond, amassing the world’s largest repository of wildlife-disease surveillance data. This project identified, characterized, and documented NWHC’s locally stored wildlife health datasets, a critical first step to migrating them to new laboratory- and public-facing data s
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Transforming Biosurveillance by Standardizing and Serving 40 Years of Wildlife Disease Data

Over the past 40 years the National Wildlife Health center has collected wildlife health information from around the U.S. and beyond, amassing the world’s largest repository of wildlife-disease surveillance data. This project identified, characterized, and documented NWHC’s locally stored wildlife health datasets, a critical first step to migrating them to new laboratory- and public-facing data s
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