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Publications

Explore scientific publications from the USGS St. Petersburg Coastal and Marine Science Center.

Filter Total Items: 921

Change in the length of the southern section of the Chandeleur Islands oil berm, January 13, 2011, through September 3, 2012

On April 20, 2010, an explosion on the Deepwater Horizon oil rig drilling at the Macondo Prospect site in the Gulf of Mexico resulted in a marine oil spill that continued to flow through July 15, 2010. One of the affected areas was the Breton National Wildlife Refuge, which consists of a chain of low-lying islands, including Breton Island and the Chandeleur Islands, and their surrounding waters. T
Authors
Nathaniel G. Plant, Kristy K. Guy

Survival of bacterial indicators and the functional diversity of native microbial communities in the Floridan aquifer system, south Florida

The Upper Floridan aquifer in the southern region of Florida is a multi-use, regional scale aquifer that is used as a potable water source and as a repository for passively recharged untreated surface waters, and injected treated surface water and wastewater, industrial wastes, including those which contain greenhouse gases (for example, carbon dioxide). The presence of confined zones within the F
Authors
John T. Lisle

Assessing mobility and redistribution patterns of sand and oil agglomerates in the surf zone

Heavier-than-water sand and oil agglomerates that formed in the surf zone following the Deepwater Horizon oil spill continued to cause beach re-oiling 3 years after initial stranding. To understand this phenomena and inform operational response now and for future spills, a numerical method to assess the mobility and alongshore movement of these “surface residual balls” (SRBs) was developed and app
Authors
P. Soupy Dalyander, Joesph W. Long, Nathaniel G. Plant, David M. Thompson

The transport of nonindigenous microorganisms into caves by human visitation: a case study at Carlsbad Caverns National Park

A series of atmospheric investigations was conducted in Carlsbad Cavern to determine if human visitation is a possible cause for the contamination of the cave system with non-indigenous microorganisms. In 2004, site-specific culture-based data demonstrated that Staphylococcus spp. colony-forming units (CFUs) were the most prevalent members of the atmospheric community along the paved visitor trail
Authors
Dale W. Griffin, Michael A. Gray, Michael B. Lyles, Diana E. Northup

Fluorescence-based classification of Caribbean coral reef organisms and substrates

A diverse group of coral reef organisms, representing several phyla, possess fluorescent pigments. We investigated the potential of using the characteristic fluorescence emission spectra of these pigments to enable unsupervised, optical classification of coral reef habitats. We compiled a library of characteristic fluorescence spectra through in situ and laboratory measurements from a variety of s
Authors
David G. Zawada, Charles H. Mazel

Ecological and evolutionary consequences of benthic community stasis in the very deep sea (>1500 m)

An enigma of deep-sea biodiversity research is that the abyss with its low productivity and densities appears to have a biodiversity similar to that of shallower depths. This conceptualization of similarity is based mainly on per-sample estimates (point diversity, within-habitat, or α-diversity). Here, we use a measure of between-sample within-community diversity (β1H) to examine benthic foraminif
Authors
Martin A. Buzas, Lee-Ann C. Hayek, Stephen J. Culver, Bruce W. Hayward, Lisa E. Osterman

USGS/EPA collection protocol for bacterial pathogens in soil

This Sample Collection Procedure (SCP) describes the activities and considerations for the collection of bacterial pathogens from representative surface soil samples (0-5 cm). This sampling depth can be reached without the use of a drill rig, direct-push technology, or other mechanized equipment. This procedure can be used in most soil types but is limited to sampling at or near the ground surface
Authors
Dale W. Griffin, F.L. Shaefer, Charlena Bowling, Dino Mattorano, Tonya Nichols, Erin Silvestri

The global dispersion of pathogenic microorganisms by dust storms and its relevance to agriculture

Dust storms move an estimated 500–5000 Tg of soil through Earth’s atmosphere every year. Dust-storm transport of topsoils may have positive effects such as fertilization of aquatic and terrestrial ecosystems and the evolution of soils in proximal and distal environments. Negative effects may include the stripping of nutrient-rich topsoils from source regions, sandblasting of plant life in downwind
Authors
Cristina Gonzalez-Martin, Nuria Teigell-Perez, Basilio Valladares, Dale W. Griffin

Evaluation of wave runup predictions from numerical and parametric models

Wave runup during storms is a primary driver of coastal evolution, including shoreline and dune erosion and barrier island overwash. Runup and its components, setup and swash, can be predicted from a parameterized model that was developed by comparing runup observations to offshore wave height, wave period, and local beach slope. Because observations during extreme storms are often unavailable, a
Authors
Hilary F. Stockdon, David M. Thompson, Nathaniel G. Plant, Joseph W. Long

An evaluation of temporal changes in sediment accumulation and impacts on carbon burial in Mobile Bay, Alabama, USA

The estuarine environment can serve as either a source or sink of carbon relative to the coastal ocean carbon budget. A variety of time-dependent processes such as sedimentation, carbon supply, and productivity dictate how estuarine systems operate, and Mobile Bay is a system that has experienced both natural and anthropogenic perturbations that influenced depositional processes and carbon cycling
Authors
Christopher G. Smith, Lisa E. Osterman

AMAP Assessment 2013: Arctic Ocean acidification

This assessment report presents the results of the 2013 AMAP Assessment of Arctic Ocean Acidification (AOA). This is the first such assessment dealing with AOA from an Arctic-wide perspective, and complements several assessments that AMAP has delivered over the past ten years concerning the effects of climate change on Arctic ecosystems and people. The Arctic Monitoring and Assessment Progra

In situ spectrophotometric measurement of dissolved inorganic carbon in seawater

Autonomous in situ sensors are needed to document the effects of today’s rapid ocean uptake of atmospheric carbon dioxide (e.g., ocean acidification). General environmental conditions (e.g., biofouling, turbidity) and carbon-specific conditions (e.g., wide diel variations) present significant challenges to acquiring long-term measurements of dissolved inorganic carbon (DIC) with satisfactory accur
Authors
Xuewu Liua, Robert H. Byrne, Lori Adornato, Kimberly K. Yates, Eric Kaltenbacher, Xiaoling Ding, Bo Yang
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