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Publications

Browse more than 150,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Upper Midwest Environmental Sciences Center Publications

Filter Total Items: 3223

Validation of eDNA markers for New Zealand mudsnail surveillance and initial eDNA monitoring at Mississippi River Basin sites

The performance of newly developed New Zealand mudsnail (Potamopyrgus antipodarum; NZMS) genetic markers for environmental (eDNA) analysis of water were compared across two laboratories. The genetic markers were tested in four quantitative polymerase chain reaction assays targeting two regions of the NZMS mitochondrial genome, specifically the cytochrome c oxidase subunit 1 (coi) and cytochrome b
Authors
Christopher M. Merkes, Keith N. Turnquist, Christopher B. Rees, Jon J. Amberg

Occurrence and distribution of fecal indicator bacteria and gene markers of pathogenic bacteria in Great Lakes tributaries, March-October 2011

From March through October 2011, the U.S. Geological Survey (USGS), conducted a study to determine the frequency of occurrence of pathogen gene markers and densities of fecal indicator bacteria (FIB) in 22 tributaries to the Great Lakes. This project was funded as part of the Great Lakes Restoration Initiative (GLRI) and included sampling at 22 locations throughout 6 states that border the Great L
Authors
Angela K. Brennan, Heather E. Johnson, Alexander R. Totten, Joseph W. Duris

Development of regression equations to revise estimates of historical streamflows for the St. Croix River at Stillwater, Minnesota (water years 1910-2011), and Prescott, Wisconsin (water years 1910-2007)

A natural dam of glacial-era sediments at the confluence of the St. Croix and Mississippi Rivers forms Lake St. Croix, a riverine lake that comprises the lowest 25 miles of the St. Croix River. Historically, backwater effects from the Mississippi River prevented the use of traditional streamgages for collecting continuous streamflow data needed to calculate nutrient loads at the inlet to and outle
Authors
Jeffrey R. Ziegeweid, Suzanne Magdalene

Geomorphic, flood, and groundwater-flow characteristics of Bayfield Peninsula streams, Wisconsin, and implications for brook-trout habitat

In 2002–03, the U.S. Geological Survey conducted a study of the geomorphic, flood, and groundwater-flow characteristics of five Bayfield Peninsula streams, Wisconsin (Cranberry River, Bark River, Raspberry River, Sioux River, and Whittlesey Creek) to determine the physical limitations for brook-trout habitat. The goals of the study were threefold: (1) to describe geomorphic characteristics and pro
Authors
Faith A. Fitzpatrick, Marie C. Peppler, David A. Saad, Dennis M. Pratt, Bernard N. Lenz

Simulation of the regional groundwater-flow system of the Menominee Indian Reservation, Wisconsin

A regional, two-dimensional, steady-state groundwater-flow model was developed to simulate the groundwater-flow system and groundwater/surface-water interactions within the Menominee Indian Reservation. The model was developed by the U.S. Geological Survey (USGS), in cooperation with the Menominee Indian Tribe of Wisconsin, to contribute to the fundamental understanding of the region’s hydrogeolog
Authors
Paul F. Juckem, Charles P. Dunning

Differences between main-channel and off-channel food webs in the upper Mississippi River revealed by fatty acid profiles of consumers

Large river systems are often thought to contain a mosaic of patches with different habitat characteristics driven by differences in flow and mixing environments. Off-channel habitats (e.g., backwater areas, secondary channels) can become semi-isolated from main-channel water inputs, leading to the development of distinct biogeochemical environments. Observations of adult bluegill (Lepomis macroch
Authors
James H. Larson, Michelle Bartsch, Steve Gutreuter, Brent C. Knights, Lynn Bartsch, William B. Richardson, Jonathan M. Vallazza, Michael T. Arts

Sources of fine sediment stored in agricultural lowland streams, Midwest, USA

Agricultural activities can accelerate the offsite transport of productive soil from fields leading to stream water quality degradation. Identification of the nature and relative contribution of different sources to fine-grained sediment (e.g., silts, clays) in streams is important to effectively focus agricultural best management practices in watersheds. Sediment fingerprinting techniques through
Authors
Jasmeet Lamba, Anita M. Thompson, K.G. Karthikeyan, Faith A. Fitzpatrick

Reducing nitrogen export from the corn belt to the Gulf of Mexico: agricultural strategies for remediating hypoxia

SPAtially Referenced Regression on Watershed models developed for the Upper Midwest were used to help evaluate the nitrogen-load reductions likely to be achieved by a variety of agricultural conservation practices in the Upper Mississippi-Ohio River Basin (UMORB) and to compare these reductions to the 45% nitrogen-load reduction proposed to remediate hypoxia in the Gulf of Mexico (GoM). Our result
Authors
Eileen McLellan, Dale M. Robertson, Keith Schilling, Mark Tomer, Jill Kostel, Douglas G. Smith, Kevin King

A model for evaluating stream temperature response to climate change in Wisconsin

Expected climatic changes in air temperature and precipitation patterns across the State of Wisconsin may alter future stream temperature and flow regimes. As a consequence of flow and temperature changes, the composition and distribution of fish species assemblages are expected to change. In an effort to gain a better understanding of how climatic changes may affect stream temperature, an approac
Authors
Jana S. Stewart, Stephen M. Westenbroek, Matthew G. Mitro, John D. Lyons, Leah E. Kammel, Cheryl A. Buchwald

Landscape-level terrestrial methane flux observed from a very tall tower

Simulating the magnitude and variability of terrestrial methane sources and sinks poses a challenge to ecosystem models because the biophysical and biogeochemical processes that lead to methane emissions from terrestrial and freshwater ecosystems are, by their nature, episodic and spatially disjunct. As a consequence, model predictions of regional methane emissions based on field campaigns from sh
Authors
Ankur R. Desai, Ke Xu, Hanqin Tian, Peter Weishampel, Jonthan Thom, Daniel D. Baumann, Arlyn E. Andrews, Bruce D. Cook, Jennifer Y. King, Randall Kolka

Process, policy, and implementation of pool-wide drawdowns on the Upper Mississippi River: a promising approach for ecological restoration of large impounded rivers

The Upper Mississippi River (UMR) has been developed and subsequently managed for commercial navigation by the U.S. Army Corps of Engineers (USACE). The navigation pools created by a series of lock and dams initially provided a complex of aquatic habitats that supported a variety of fish and wildlife. However, biological productivity declined as the pools aged. The River Resources Forum, an adviso
Authors
Kevin P. Kenow, Gretchen Benjamin, Tim Schlagenhaft, Ruth Nissen, Mary Stefanski, Gary Wege, Scott A. Jutila, Teresa J. Newton