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Publications

Below is a list of WERC's peer-reviewed publications. If you are searching for a specific publication and cannot find it in this list, please contact werc_web@usgs.gov

Filter Total Items: 3617

Risks of avian influenza transmission in areas of intensive free-ranging duck production with wild waterfowl

For decades, southern China has been considered to be an important source for emerging influenza viruses since key hosts live together in high densities in areas with intensive agriculture. However, the underlying conditions of emergence and spread of avian influenza viruses (AIV) have not been studied in detail, particularly the complex spatiotemporal interplay of viral transmission between wild
Authors
Julien Cappelle, Delong Zhao, Marius Gilbert, Scott H. Newman, John Y. Takekawa, Nicolas Gaidet, Diann J. Prosser, Ying Liu, Peng Li, Yuelong Shu, Xiangming Xiao

Pacific Continental Shelf Environmental Assessment (PaCSEA): aerial seabird and marine mammal surveys off northern California, Oregon, and Washington, 2011-2012

Marine birds and mammals comprise an important community of meso- and upper-trophic-level predators within the northern California Current System (NCCS). The NCCS is located within one of the world’s four major eastern boundary currents and is characterized by an abundant and diverse marine ecosystem fuelled seasonally by wind-driven upwelling which supplies nutrient-rich water to abundant phytopl
Authors
Josh Adams, Jonathan J. Felis, John W. Mason, John Y. Takekawa

Temperate and boreal forest mega-fires: characteristics and challenges

Mega-fires are often defined according to their size and intensity but are more accurately described by their socioeconomic impacts. Three factors – climate change, fire exclusion, and antecedent disturbance, collectively referred to as the “mega-fire triangle” – likely contribute to today's mega-fires. Some characteristics of mega-fires may emulate historical fire regimes and can therefore sustai
Authors
Scott L. Stephens, Neil Burrows, Alexander Buyantuyev, Robert W. Gray, Robert E. Keane, Rick Kubian, Shirong Liu, Francisco Seijo, Lifu Shu, Kevin G. Tolhurst, Jan W. Van Wagtendonk

Effects of wetland management on carrying capacity of diving ducks and shorebirds in a coastal estuary

With global loss of natural wetlands, managed wetlands increasingly support energy requirements for wintering shorebirds and waterfowl. Despite numerous studies of avian bioenergetics in freshwater systems, less is known of the energetic capacity of estuarine systems. In San Francisco Bay, managed saline ponds converted from former commercial salt evaporation ponds form part of the largest wetland
Authors
L. Arriana Brand, John Y. Takekawa, Joel Shinn, Tanya Graham, Kevin Buffington, K. Benjamin Gustafson, Lacy M. Smith, Sarah E. Spring, A. Keith Miles

Relative contribution of lipid sources to eggs of lesser scaup

Studies of how birds mobilize nutrients to eggs have traditionally considered a continuum of possible allocation strategies ranging from income breeding (rely on food sources found on the breeding grounds) to capital breeding (rely on body reserves stored prior to the breeding season). For capital breeding, stored body reserves can be acquired either on or away from the breeding grounds, but it ha
Authors
Kyle A. Cutting, Keith A. Hobson, Jay J. Rotella, Jeffrey M. Warren, John Y. Takekawa, Susan E.W. De La Cruz, Michael Parker

Abalone farm discharges the withering syndrome pathogen into the wild

An intracellular bacterium Candidatus Xenohaliotis californiensis, also called Withering-Syndrome Rickettsia-Like Organism (WS-RLO), is the cause of mass mortalities that are the chief reason for endangerment of black abalone (Haliotis cracherodii). Using a real-time PCR assay, we found that a shore-based abalone farm (AF) in Santa Barbara, CA, USA discharged WS-RLO DNA into the ocean. Several oth
Authors
Kevin D. Lafferty, Tal Ben-Horin

Resource selection and space use by sea ducks during the non-breeding season: Implications for habitat conservation planning in urbanized estuaries

Wide-ranging marine birds rely on multiple habitats for wintering, breeding, and migrating, and their conservation may be dependent on protecting networks of key areas. Urbanized estuaries are critical wintering and stopover areas for many declining sea ducks in North America; however, conservation measures within estuaries are difficult to establish given lack of knowledge about habitat use by th
Authors
Susan E. W. De La Cruz, John M. Eadie, A. Keith Miles, Julie Yee, Kyle A. Spragens, Eric C. Palm, John Y. Takekawa

Habitat characteristics of North American tortoises

North American tortoises are distributed in semi-arid and temperate deserts and coastal regions of the southern United States and Mexico. The five species currently recognized each have specific habitat requirements, which they fulfill through their selection of, and interaction with unique habitat constituents. In this chapter we discuss the physiographic and geological associations, perennial an
Authors
Kenneth E. Nussear, Tracey D. Tuberville

Potential environmental effects of pack stock on meadow ecosystems of the Sierra Nevada, USA

Pack and saddle stock, including, but not limited to domesticated horses, mules, and burros, are used to support commercial, private and administrative activities in the Sierra Nevada. The use of pack stock has become a contentious and litigious issue for land management agencies in the region inter alia due to concerns over effects on the environment. The potential environmental effects of pack s
Authors
Steven M. Ostoja, Matthew L. Brooks, Peggy E. Moore, Eric L. Berlow, Robert Blank, Jim Roche, Jennifer T. Chase, Sylvia Haultain

Protection benefits desert tortoise (Gopherus agassizii) abundance: the influence of three management strategies on a threatened species

We surveyed an area of ∼260 km2 in the western Mojave Desert to evaluate relationships between condition of Agassiz's Desert Tortoise populations (Gopherus agassizii) and habitat on lands that have experienced three different levels of management and protection. We established 240 1-ha plots using random sampling, with 80 plots on each of the three types of managed lands. We conducted surveys in s
Authors
Kristin H. Berry, Lisa M. Lyren, Julie L. Yee, Tracy Y. Bailey

Biodiversity loss and infectious diseases

When conservation biologists think about infectious diseases, their thoughts are mostly negative. Infectious diseases have been associated with the extinction and endangerment of some species, though this is rare, and other factors like habitat loss and poorly regulated harvest still are the overwhelming drivers of endangerment. Parasites are pervasive and play important roles as natural enemies o
Authors
Kevin D. Lafferty

The role of infectious disease in marine communities

Marine ecologists recognize that infectious diseases play and important role in ocean ecosystems. This role may have increased in some host taxa over time (Ward and Lafferty 2004). We begin this chapter by introducing infectious agents and their relationships with their hosts in marine systems. We then put infectious disease agents with their hosts in marine systems. We then put infectious disease
Authors
Kevin D. Lafferty, C. Drew Harvell