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Publications

Below is a list of WERC's peer-reviewed publications. If you are searching for a specific publication and cannot find it in this list, please contact werc_web@usgs.gov

Filter Total Items: 3617

Field detection of avian influenza virus in wild birds: evaluation of a portable rRT-PCR system and freeze-dried reagents

Wild birds have been implicated in the spread of highly pathogenic avian influenza (HPAIV) of the H5N1 subtype, prompting surveillance along migratory flyways. Sampling of wild birds is often conducted in remote regions, but results are often delayed because of limited local analytical capabilities, difficulties with sample transportation and permitting, or problems keeping samples cold in the fie
Authors
John Y. Takekawa, Samuel A. Iverson, Annie K. Schultz, Nichola J. Hill, Carol J. Cardona, Walter M. Boyce, Joseph P. Dudley

Habitat suitability and conservation of the giant gartersnake (Thamnophis gigas) in the Sacramento Valley of California

Resource managers often have little information regarding the habitat requirements and distribution of rare species. Factor analysis-based habitat suitability models describe the ecological niche of a species and identify locations where these conditions occur on the landscape using existing occurrence data.We used factor analyses to assess the suitability of habitats for Thamnophis gigas (Giant G
Authors
Brian J. Halstead, Glenn D. Wylie, Michael L. Casazza

Ants as a measure of effectiveness of habitat conservation planning in southern California

In the United States multispecies habitat conservation plans were meant to be the solution to conflicts between economic development and protection of biological diversity. Although now widely applied, questions exist concerning the scientific credibility of the conservation planning process and effectiveness of the plans. We used ants to assess performance of one of the first regional conservatio
Authors
Milan J. Mitrovich, Tritia Matsuda, Krista H. Pease, Robert N. Fisher

Guiding concepts for park and wilderness stewardship in an era of global environmental change

The major challenge to stewardship of protected areas is to decide where, when, and how to intervene in physical and biological processes, to conserve what we value in these places. To make such decisions, planners and managers must articulate more clearly the purposes of parks, what is valued, and what needs to be sustained. A key aim for conservation today is the maintenance and restoration of b
Authors
Richard J. Hobbs, David N. Cole, Laurie Yung, Erika S. Zavaleta, Gregory H. Aplet, F. Stuart Chapin, Peter B. Landres, David J. Parsons, Nathan L. Stephenson, Peter S. White, David M. Graber, Eric S. Higgs, Constance I. Millar, John M. Randall, Kathy A. Tonnessen, Stephen Woodley

Demographic studies of Joshua trees in Mojave Desert National Parks: demography with emphasis on germination and recruitment

The study of population change with regard to reproduction, seed dispersal, and germination, establishment, growth, and survival/mortality is known as demography. Demographic studies provide managers with information to assess future trends on the density, distribution, health, and population changes of importance or value, including Joshua trees (Yucca brevifolia). Demographic research provides t
Authors
T. C. Esque, B. Reynolds, L.A. DeFalco, B.A. Waitman

Correlating seabird movements with ocean winds: linking satellite telemetry with ocean scatterometry.

Satellite telemetry studies of the movements of seabirds are now common and have revealed impressive flight capabilities and extensive distributions among individuals and species at sea. Linking seabird movements with environmental conditions over vast expanses of the world's open ocean, however, remains difficult. Seabirds of the order Procellariiformes (e.g., petrels, albatrosses, and shearwater
Authors
Josh Adams, Stephanie Flora

Decadal trends in marine reserves reveal differential rates of change in direct and indirect effects

Decadal-scale observations of marine reserves suggest that indirect effects on taxa that occur through cascading trophic interactions take longer to develop than direct effects on target species. Combining and analyzing a unique set of long-term time series of ecologic data in and out of fisheries closures from disparate regions, we found that the time to initial detection of direct effects on tar
Authors
R.C. Babcock, N.T. Shears, A.C. Alcala, N.S. Barrett, G.J. Edgar, K. D. Lafferty, T.R. McClanahan, G.R. Russ

Changes in the status of harvested rice fields in the Sacramento Valley, California: Implications for wintering waterfowl.

Harvested rice fields provide critical foraging habitat for wintering waterfowl in North America, but their value depends upon post-harvest treatments. We visited harvested ricefields in the Sacramento Valley, California, during the winters of 2007 and 2008 (recent period) and recorded their observed status as harvested (standing or mechanically modified stubble), burned, plowed, or flooded. We co
Authors
Michael R. Miller, Jay D. Garr, Peter S. Coates

A rapid, strong, and convergent genetic response to urban habitat fragmentation in four divergent and widespread vertebrates

Background: Urbanization is a major cause of habitat fragmentation worldwide. Ecological and conservation theory predicts many potential impacts of habitat fragmentation on natural populations, including genetic impacts. Habitat fragmentation by urbanization causes populations of animals and plants to be isolated in patches of suitable habitat that are surrounded by non-native vegetation or severe
Authors
Kathleen Semple Delaney, Seth P.D. Riley, Robert N. Fisher

Lesions and behavior associated with forced copulation of juvenile Pacific harbor seals (Phoca vitulina richardsi) by southern sea otters (Enhydra lutris nereis)

Nineteen occurrences of interspecific sexual behavior between male southern sea otters (Enhydra lutris nereis) and juvenile Pacific harbor seals (Phoca vitulina richardsi) were reported in Monterey Bay, California, between 2000 and 2002. At least three different male sea otters were observed harassing, dragging, guarding, and copulating with harbor seals for up to 7 d postmortem. Carcasses of 15 j
Authors
Heather S. Harris, Stori C. Oates, Michelle M. Staedler, M. Tim Tinker, David A. Jessup, James T. Harvey, Melissa A. Miller

Bat guano virome: Predominance of dietary viruses from insects and plants plus novel mammalian viruses

Bats are hosts to a variety of viruses capable of zoonotic transmissions. Because of increased contact between bats, humans, and other animal species, the possibility exists for further cross-species transmissions and ensuing disease outbreaks. We describe here full and partial viral genomes identified using metagenomics in the guano of bats from California and Texas. A total of 34% and 58% of 390
Authors
Linlin Li, G. Victoria Joseph, Chunlin Wang, Morris Jones, Gary M. Fellers, Thomas H. Kunz, Eric Delwart

Estimating aboveground biomass for broadleaf woody plants and young conifers in Sierra Nevada, California forests

Quantification of biomass is fundamental to a wide range of research and natural resource management goals. An accurate estimation of plant biomass is essential to predict potential fire behavior, calculate carbon sequestration for global climate change research, assess critical wildlife habitat, and so forth. Reliable allometric equations from simple field measurements are necessary for efficient
Authors
Thomas W. McGinnis, Christine D. Shook, Jon E. Keeley