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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41763

Priorities for translating goodwill between movement ecologists and conservation practitioners into effective collaboration

Addressing ongoing biodiversity loss requires collaboration between conservation scientists and practitioners. However, such collaboration has proved challenging. Despite the potential importance of tracking animal movements for conservation, reviews of the tracking literature have identified a gap between the academic discipline of movement ecology and its application to biodiversity conservation
Authors
Rascha J. M. Nuijten, Todd E. Katzner, Andrew M. Allen, Allert I. Bijleveld, Tjalle Boorsma, Luca Börger, Francesca Cagnacci, Tom Hart, Michelle Henley, Richard M. Herren, Eva Kok, Bronwyn Maree, Bruno Nebe, David Shohami, Susanne Marieke Vogel, Paul Walker, Ignas M. A. Heitkönig, E. J. Milner-Gulland

Environmental implications of Ptolemaic Period rodents and shrews from the Sacred Falcon Necropolis at Quesna, Egypt (Mammalia: Muridae and Soricidae)

BackgroundAssemblages of mummified and preserved animals in necropoleis of Ptolemaic Period Egypt (ca. 332–30 BC) document some aspects of the ceremonial and religious practices of the ancient Egyptians, but study of these animal remains can also provide insight into the local environments in which the animals and humans lived.ResultsExcavations of the Sacred Falcon Necropolis at Quesna in the Nil
Authors
Neal Woodman, Salima Ikram, Joanne Rowland

Distributions of Cisco (Coregonus artedi) in the upper Great Lakes in the mid-twentieth century, when populations were in decline

The restoration of the once abundant Cisco (Coregonus artedi) is a management interest across the Laurentian Great Lakes. To inform the restoration, we (1) described historical distributions of Cisco and (2) explored whether non-indigenous Rainbow Smelt (Osmerus mordax) and Alewife (Alosa pseudoharengus) played a role in the decline of Cisco populations across the upper Great Lakes (i.e., Lakes Su
Authors
Yu-Chun Kao, Renee Elizabeth Renauer, David Bunnell, Owen Gorman, Randy L. Eshenroder

Models combining multiple scales of inference capture hydrologic and climatic drivers of riparian tree distributions

Predicting species geographic distributions is key to managing invasive species, conserving biodiversity, and understanding species' environmental requirements. Species distribution models (SDMs) commonly focus on climatic predictors, but other environmental factors can also be essential, particularly for species with specialized habitats defined by hydrologic, topographic, or edaphic conditions (
Authors
Laura G Perry, Catherine S. Jarnevich, Patrick B. Shafroth

Analysis of per capita contributions from a spatial model provides strategies for controlling spread of invasive carp

Metapopulation models may be applied to inform natural resource management to guide actions targeted at location-specific subpopulations. Model insights frequently help to understand which subpopulations to target and highlight the importance of connections among subpopulations. For example, managers often treat aquatic invasive species populations as discrete populations due to hydrological (e.g.
Authors
Donald Schoolmaster, Alison A. Coulter, Jahn L. Kallis, David C. Glover, John M. Dettmers, Richard A. Erickson

Sharing land via keystone structure: Retaining naturally regenerated trees may efficiently benefit birds in plantations

Meeting food/wood demands with increasing human population and per-capita consumption is a pressing conservation issue, and is often framed as a choice between land sparing and land sharing. Although most empirical studies comparing the efficacy of land sparing and sharing supported land sparing, land sharing may be more efficient if its performance is tested by rigorous experimental design and ha
Authors
Yuichi Yamaura, Akira Unno, Andy Royle

A genetic warning system for a hierarchically structured wildlife monitoring framework

Genetic variation is a well-known indicator of population fitness yet is not typically included in monitoring programs for sensitive species. Additionally, most programs monitor populations at one scale, which can lead to potential mismatches with ecological processes critical to species' conservation. Recently developed methods generating hierarchically nested population units (i.e., clusters of
Authors
Shawna J Zimmerman, Cameron L. Aldridge, Michael O'Donnell, David R. Edmunds, Peter S. Coates, Brian G. Prochazka, Jennifer A. Fike, Todd B. Cross, Bradley C. Fedy, Sara J. Oyler-McCance

Terrestrial lidar monitoring of the effects of Glen Canyon Dam operations on the geomorphic condition of archaeological sites in Grand Canyon National Park, 2010–2020

The U.S. Geological Survey’s Grand Canyon Monitoring and Research Center, in coordination with the Glen Canyon Dam Adaptive Management Program, has monitored the geomorphic condition of select archaeological sites along the Colorado River in Grand Canyon using high-resolution terrestrial light detection and ranging (lidar) topographic surveys. Many of these sites are vulnerable to degradation by n
Authors
Joshua Caster, Joel B. Sankey, Helen Fairley, Alan Kasprak

Comparison of two estrogen chemically activated luciferase expression cell bioassays to liquid chromatography–mass spectrometry for quantifying estrone in water samples

Chemically activated luciferase expression (CALUX) cell bioassays are popular tools for assessing endocrine activity of chemicals such as certain environmental contaminants. Although activity equivalents can be obtained from CALUX analysis, directly comparing these equivalents to those obtained from analytical chemistry methods can be problematic because of the complexity of endocrine active pathw
Authors
Jennifer C. Brennan, Abigail Henke, Robert Gale, Diane K. Nicks, Donald Tillitt

Habitat connectivity and host relatedness influence virus spread across an urbanising landscape in a fragmentation-sensitive carnivore

Spatially heterogeneous landscape factors such as urbanisation can have substantial effects on the severity and spread of wildlife diseases. However, research linking patterns of pathogen transmission to landscape features remains rare. Using a combination of phylogeographic and machine learning approaches, we tested the influence of landscape and host factors on feline immunodeficiency virus (FIV
Authors
Christopher P. Kozakiewicz, Christopher P. Burridge, Justin S. Lee, Simona J Kraberger, Nicholas M Fountain-Jones, Robert N. Fisher, Lisa M. Lyren, Megan K. Jennings, Seth P D Riley, Laurel E K Serieys, Meggan E. Craft, W Chris Funk, Kevin R. Crooks, Sue VandeWoude, Scott Carver

Estimating phosphorus retention capacity of flow-through wetlands

A Bayesian hierarchical modeling approach is introduced to pool data properly from multiple flow-through wetlands to estimate wetland-specific long-term phosphorus retention capacity. By pooling data from multiple wetlands, we overcome the difficulties in estimating the effectiveness of using constructed and natural wetlands for nutrient reduction. The Bayesian hierarchical modeling approach reduc
Authors
Song S. Qian, Kristi K. Arend, Stephen J Jacquemin, S. Mazeika Patricio Sullivan, Kurt P. Kowalski

North American Bat Monitoring Program (NABat) mobile acoustic transect surveys standard operating procedure 3—Conducting mobile transect surveys

This standard operating procedure (SOP) provides instructions and considerations for conducting mobile acoustic surveys along road transects to collect bat acoustic data following the North American Bat Monitoring Program (NABat) protocol and sample design. This report discusses measures for ensuring the safety of surveyors and efficiency of mobile transect surveys. This guidance is intended to ai
Authors
Jaclyn Martin, MacKenzie Hall, Emily Ferrall, Han Li, Jason Rae, Bethany Straw, Brian Reichert