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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41763

Addressing detection uncertainty in Bombus affinis (Hymenoptera: Apidae) surveys can improve inferences made from monitoring

The U.S. Fish and Wildlife Service developed national guidelines to track species recovery of the endangered rusty patched bumble bee [Bombus affinis Cresson (Hymenoptera: Apidae)] and to investigate changes in species occupancy across space and time. As with other native bee monitoring efforts, managers have specifically acknowledged the need to address species detection uncertainty and determine
Authors
Clint R.V. Otto, Alma Schrage, Larissa L. Bailey, John Michael Mola, Tamara A. Smith, Ian Pearse, Stacy C. Simanonok, Ralph Grundel

Density surface and excursion sets modeling as an approach to estimating population densities

Effective species management and conservation require knowledge of species distribution and status. We used point-transect distance sampling surveys of the endangered palila (Loxioides bailleui), a honeycreeper currently found only on the Island of Hawai'i, USA, to generate robust estimates of total abundance and simultaneously model the distribution, abundance, and spatial correlation of the spec
Authors
Richard J. Camp, Chauncey K. Asing, Paul C. Banko, Lainie Berry, Kevin W. Brinck, Chris Farmer, Ayesha Genz

Automatic recorders monitor wolves at rendezvous sites: do wolves adjust howling to live near humans?

We used automatic sound recorders to study spontaneous vocalizations of wild wolves during the pup-rearing season around rendezvous sites from 24 wolf packs in six study areas across North America, Asia, and Europe. Between 2018 and 2021, for a total of 1225 pack-days, we recorded 605 spontaneous wolf chorus howls and 224 solo-howl series. Howling occurrence varied across areas, from 12.50 to 94.1
Authors
Vicente Palacios, Bárbara Martí-Domken, Shannon Barber-Meyer, Bilal Habib, José Vicente López-Bao, Douglas W. Smith, Daniel R. Stahler, Emilio José García, Víctor Sazatornil, L. David Mech

A near four-decade time series shows the Hawaiian Islands have been browning since the 1980s

The Hawaiian Islands have been identified as a global biodiversity hotspot. We examine the Normalized Difference Vegetation Index (NDVI) using Climate Data Records products (0.05 × 0.05°) to identify significant differences in NDVI between neutral El Niño-Southern Oscillation years (1984, 2019) and significant long-term changes over the entire time series (1982–2019) for the Hawaiian Islands and s
Authors
Austin Madson, Monica Dimson, Lucas Fortini, Kapua Kawelo, Tamara Tickin, Matt Keir, Chunyu Dong, Zhimin Ma, David W Beilman, Kelly Kay, Jonathan Pando Ocón, Erica Gallerani, Stephanie Pau, Thomas W Gillespie

Animal tracing with sulfur isotopes: Spatial segregation and climate variability in Africa likely contribute to population trends of a migratory songbird

Climatic conditions affect animals but range-wide impacts at the population level remain largely unknown, especially in migratory species. However, studying climate–population relationships is still challenging in small migrants due to a lack of efficient and cost-effective geographic tracking method.Spatial distribution patterns of environmental stable isotopes (so called ‘isoscapes’) generally o
Authors
Vojtech Brlik, Petr Prochazka, Bengt Hansson, Craig A. Stricker, Elizabeth Yohannes, Rebecca L Powell, Michael B. Wunder

Response of soil respiration to changes in soil temperature and water table level in drained and restored peatlands of the southeastern United States

Extensive drainage of peatlands in the southeastern United States coastal plain for the purposes of agriculture and timber harvesting has led to large releases of soil carbon as carbon dioxide (CO2) due to enhanced peat decomposition. Growth in mechanisms that provide financial incentives for reducing emissions from land use and land-use change could increase funding for hydrological restoration t
Authors
Erin E. Swails, Marcelo Ardon, Ken Krauss, A.L. Peralta, Ryan E. Emmanuel, A.M. Helton, J.L. Morse, Laurel Gutenberg, Nicole Cormier, D. Shoch, Scott Settlemyer, Eric Soderholm, Brian P. Boutin, Chuck Peoples, Sara Ward

Exploring the role of cryptic nitrogen fixers in terrestrial ecosystems: A frontier in nitrogen cycling research

Biological nitrogen fixation represents the largest natural flux of new nitrogen (N) into terrestrial ecosystems, providing a critical N source to support net primary productivity of both natural and agricultural systems. When they are common, symbiotic associations between plants and bacteria can add more than 100 kg N ha−1 y−1 to ecosystems. Yet, these associations are uncommon in many terrestri
Authors
Cory Cleveland, Carla R. G. Reis, Steven Perakis, Katherine A Dynarski, Sarah Batterman, Timothy Crews, Maga Gei, Michael Gundale, Duncan Menge, Mark Peoples, Sasha C. Reed, Verity Salmon, Fiona M. Soper, Benton Taylor, Monica Turner, Nina Wurzburger

Evaluations of Lagrangian egg drift models: From a laboratory flume to large channelized rivers

To help better interpret computational models in predicting drift of carp eggs in rivers, we present a series of model assessments for the longitudinal egg dispersion. Two three-dimensional Lagrangian particle tracking models, SDrift and FluEgg, are evaluated in a series of channels with increasing complexity. The model evaluation demonstrates that both models are able to accommodate channel compl
Authors
Geng Li, Caroline M. Elliott, Bruce Call, Duane Chapman, Robert B. Jacobson, Binbin Wang

Carbon and carbon storage in the national wilderness preservation system of the conterminous United States

No abstract available.
Authors
Daniel W McCollum, Michael H Hand, Pamela M Froemke, Christopher Huber

A practical guide to understanding and validating complex models using data simulations

Biologists routinely fit novel and complex statistical models to push the limits of our understanding. Examples include, but are not limited to, flexible Bayesian approaches (e.g. BUGS, stan), frequentist and likelihood-based approaches (e.g. packages lme4) and machine learning methods.These software and programs afford the user greater control and flexibility in tailoring complex hierarchical mod
Authors
Graziella Vittoria Direnzo, Ephraim Hanks, David A. W. Miller

Spatial and temporal patterns in Arctic mosquito abundance

Organisms that undergo a shift in ontogeny and habitat type often change their spatial distribution throughout their life cycle, but how this affects population dynamics remains poorly understood.We examined spatial and temporal patterns in Aedes nigripes abundance, a widespread univoltine Arctic mosquito species (Diptera: Culicidae), hypothesizing that the spatial distribution of adults would be
Authors
Melissa H DeSiervo, Rebecca A Finger-Higgens, Matthew P. Ayres, Ross A Virginia, Lauren E Culler

Evaluation of fish behavior at the entrances to a Selective Water Withdrawal structure in Lake Billy Chinook, Oregon, 2021

Imaging sonar was used to assess the behavior, abundance, and timing of fish at the entrances to the Selective Water Withdrawal (SWW) intake structure located in the forebay of Round Butte Dam, Oregon during the spring of 2021. The purposes of the SWW are (1) to direct surface currents in the forebay to attract and collect downriver migrating juvenile salmonid smolts (Chinook salmon [Oncorhynchus
Authors
Collin D. Smith, Tyson W. Hatton