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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41756

Existing evidence on the effects of climate variability and climate change on ungulates in North America: A systematic map

BackgroundClimate is an important driver of ungulate life-histories, population dynamics, and migratory behaviors. Climate conditions can directly impact ungulates via changes in the costs of thermoregulation and locomotion, or indirectly, via changes in habitat and forage availability, predation, and species interactions. Many studies have documented the effects of climate variability and climate
Authors
Kate Malpeli, Sarah C. Endyke, Sarah R. Weiskopf, Laura Thompson, Ciara G. Johnson, Katherine Anne Kurth, Maxfield A. Carlin

Deep learning workflow to support in-flight processing of digital aerial imagery for wildlife population surveys

Deep learning shows promise for automating detection and classification of wildlife from digital aerial imagery to support cost-efficient remote sensing solutions for wildlife population monitoring. To support in-flight orthorectification and machine learning processing to detect and classify wildlife from imagery in near real-time, we evaluated deep learning methods that address hardware limitati
Authors
Tsung-Wei Ke, Stella X Yu, Mark D. Koneff, David L. Fronczak, Luke J. Fara, Travis Harrison, Kyle Lawrence Landolt, Enrika Hlavacek, Brian R. Lubinski, Timothy White

Propensity score matching mitigates risk of faulty inferences in observational studies of effectiveness of restoration trials

Determining effectiveness of restoration treatments is an important requirement of adaptive management, but it can be non-trivial where only portions of large and heterogeneous landscapes of concern can be treated and sampled. Bias and non-randomness in the spatial deployment of treatment and thus sampling is nearly unavoidable in the data available for large-scale management trials, and the bioph
Authors
Chad Raymond Kluender, Matthew Germino, Christopher A Anthony

Identifying an understudied interface: Preliminary evaluation of the use of retention ponds on commercial poultry farms by wild waterfowl

While the recent incursion of highly pathogenic avian influenza into North America has resulted in notable losses to the commercial poultry industry, the mechanism by which virus enters commercial poultry houses is still not understood. One theorized mechanism is that waterfowl shed virus into the environment surrounding poultry farms, such as into retention ponds, and is then transmitted into pou
Authors
Jeffery D. Sullivan, Ayla McDonough, Lauren Lescure, Diann Prosser

Quantifying and evaluating strategies to decrease carbon dioxide emissions generated from tourism to Yellowstone National Park

The tourism industry needs strategies to reduce emissions and hasten the achievement of global carbon dioxide (CO2) emission reduction targets. Using a case study approach, we estimated CO2 emissions related to park tourism in Yellowstone National Park (USA) generated from transit to and from the park, transit within the park, accommodations, and park operations. Results indicate tourism to Yellow
Authors
Emily J. Wilkins, Dani T. Dagan, Jordan W. Smith

Effects and perceptions of weather, climate, and climate change on outdoor recreation and nature-based tourism in the United States: A systematic review

Weather, climate, and climate change all effect outdoor recreation and tourism, and will continue to cause a multitude of effects as the climate warms. We conduct a systematic literature review to better understand how weather, climate, and climate change affect outdoor recreation and nature-based tourism across the United States. We specifically explore how the effects differ by recreational acti
Authors
Emily J. Wilkins, Lydia Horne

Range-wide genetic analysis of an endangered bumble bee (Bombus affinis, Hymenoptera: Apidae) reveals population structure, isolation by distance, and low colony abundance

Declines in bumble bee species range and abundances are documented across multiple continents and have prompted the need for research to aid species recovery and conservation. The rusty patched bumble bee (Bombus affinis) is the first federally listed bumble bee species in North America. We conducted a range-wide population genetics study of B. affinis from across all extant conservation units to
Authors
John Mola, Ian Pearse, Michelle Boone, Elaine Evans, Mark Hepner, Robert Jean, Jade Kochanski, Cade Nordmeyer, Eric Runquist, Tamara A. Smith, Jaime Strange, Jay Watson, Jonathan B Koch

Vegetation, fuels, and fire-behavior responses to linear fuel-break treatments in and around burned sagebrush steppe: Are we breaking the grass-fire cycle?

BackgroundLinear fuel breaks are being implemented to moderate fire behavior and improve wildfire containment in semiarid landscapes such as the sagebrush steppe of North America, where extensive losses in perennial vegetation and ecosystem functioning are resulting from invasion by exotic annual grasses (EAGs) that foster large and recurrent wildfires. However, fuel-break construction can also po
Authors
Matthew Germino, Samuel J. Price, Susan J Prichard

Comparing modern identification methods for wild bees: Metabarcoding and image-based morphological taxonomic assignment

With the decline of bee populations worldwide, studies determining current wild bee distributions and diversity are increasingly important. Wild bee identification is often completed by experienced taxonomists or by genetic analysis. The current study was designed to compare two methods of identification including: (1) morphological identification by experienced taxonomists using images of field-c
Authors
Cassandra Smith, Robert S. Cornman, Jennifer A. Fike, Johanna M. Kraus, Sara J. Oyler-McCance, Carrie E Givens, Michelle Hladik, Mark W. Vandever, Dana W. Kolpin, Kelly Smalling

Nontarget effects of pre-emergent herbicides and a bioherbicide on soil resources, processes, and communities

Community-type conversions, such as replacement of perennials by exotic annual grasses in semiarid desert communities, are occurring due to plant invasions that often create positive plant–soil feedbacks, which favor invaders and make restoration of native perennials difficult. Exotic annual grass control measures, such as pre-emergent herbicides, can also alter soil ecosystems directly or indirec
Authors
Brynne E. Lazarus, Matthew Germino, Marie-Anne de Graaff

Fishes move to transient local refuges, not persistent landscape refuges during river drying experiment

Anthropogenically driven flow intermittency is increasing in freshwater streams, with important implications for the management and conservation of aquatic ecosystems. Because most freshwater fishes are mobile, they are expected to emigrate from intermittent reaches, but this may not be true in streams transitioning from perennial to intermittent. Here, we attempt to determine if riverine fishes v
Authors
Thomas P Archdeacon, Eric J. Gonzales, Charles Yackulic

Estimating migration timing and abundance in partial migratory systems by integrating continuous antenna detections with physical captures

Many populations migrate between two different habitats (e.g. wintering/foraging to breeding area, mainstem–tributary, river–lake, river–ocean, river–side channel) as part of their life history. Detection technologies, such as passive integrated transponder (PIT) antennas or sonic receivers, can be placed at boundaries between habitats (e.g. near the confluence of rivers) to detect migratory movem
Authors
Maria C. Dzul, William L. Kendall, Charles Yackulic, D.R. Van Haverbeke, P. Mackinnon, K. Young, M. Pillow, Joseph E Thomas