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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41763

Highly pathogenic avian influenza (HPAI): An emerging disease threat in North America

Highly pathogenic avian influenza (HPAI) is an ecologically and economically significant avian disease that is quickly spreading among wild and domestic birds throughout North America. In this blog post, we provide information and resources that can help you to be informed, be prepared, and be ready to take appropriate action should you observe wild birds that may be affected by HPAI.
Authors
Andrew M. Ramey, Colleen M. Handel

Reference values and comparison of blood chemistry and plasma protein values between gold standard analyzers and four point-of-care devices in free-ranging canvasbacks (Aythya valisineria)

Accurate, timely, and cost-effective blood chemistry analysis is an essential tool for directing emergency treatment, monitoring the health status of captive and free-ranging individuals and flocks, and improving the efficacy of conservation actions. Blood samples were obtained from 52 canvasbacks (Aythya valisineria) that were captured on San Francisco Bay, California, during December 2017 as par
Authors
Nancy L. Anderson, Susan E. W. De La Cruz, Maris Brenn-White, Greg Frankfurter, Michael H. Ziccardi, Beatriz Martínez-López

Computed tomography for measuring body fat reserves in threatened Mohave desert tortoise (Gopherus agassizii)

Noninvasive methods for measuring fat reserves in both captive and free-ranging animals are important for monitoring individual and population health, but chelonian anatomy and physiology present challenges to accurate measurements. Standard field-based methods for assessing body condition in Mojave desert tortoises (Gopherus agassizii) involve the qualitative body condition score, which relies on
Authors
M A Walden, Rachel Jania, Matthew E Kinney, Anne Devan-Song, K. Kristina Drake, Todd C. Esque, Kevin T. Shoemaker

Statistical assessment on determining local presence of rare bat species

Surveying cryptic, sparsely distributed taxa using autonomous recording units, although cost-effective, provides imperfect knowledge about species presence. Summertime bat acoustic surveys in North America exemplify the challenges with characterizing sources of uncertainty: observation error, inability to census populations, and natural stochastic variation. Statistical uncertainty, if not conside
Authors
Kathryn M. Irvine, Katharine M. Banner, Christian Stratton, W. Mark Ford, Brian Reichert

The consequences of climate change for dryland biogeochemistry

Drylands, which cover more than 40% of Earth’s terrestrial surface, are dominant drivers of global biogeochemical cycling and home to more than one third of the human population. Climate projections predict warming, drought frequency and severity, and evaporative demand will increase in drylands at faster rates than global means. Due to extreme temperatures and high biological dependency on limite
Authors
Brooke Bossert Osborne, Brandon T. Bestelmeyer, Courtney M. Currier, Peter M Homyak, Heather L. Throop, Kristina E Young, Sasha C. Reed

Resist, accept, and direct responses to biological invasions: A social–ecological perspective

Biological invasions represent an important and unique case of ecological transformation that can strongly influence species and entire ecosystems. Challenges in managing invasions arise on multiple fronts, ranging from diverse and often divergent values associated with native and introduced species, logistical constraints, and transformation via other change agents (e.g., climate and land-use cha
Authors
Jason B. Dunham, Joseph R. Benjamin, David J. Lawrence, Katherine Clifford

A haploid pseudo-chromosome genome assembly for a keystone sagebrush species of western North American rangelands

Increased ecological disturbances, species invasions, and climate change are creating severe conservation problems for several plant species that are widespread and foundational. Understanding the genetic diversity of these species and how it relates to adaptation to these stressors are necessary for guiding conservation and restoration efforts. This need is particularly acute for big sagebrush (A
Authors
Anthony E. Melton, Andrew W. Child, Richard S. Beard, Carlos Dave C. Dumaguit, Jennifer S. Forbey, Matthew Germino, Marie-Anne de Graaff, Andrew Kliskey, Ilia J. Leitch, Peggy Martinez, Stephen J. Novak, Jaume Pellicer, Bryce A. Richardson, Desiree Self, Marcelo D. Serpe, Sven Buerki

How do accuracy and model agreement vary with versioning, scale, and landscape heterogeneity for satellite-derived vegetation maps in sagebrush steppe?

Maps of the distribution and abundance of dominant plants derived from satellite data are essential for ecological research and management, particularly in the vast semiarid shrub-steppe. Appropriate application of these maps requires an understanding of model accuracy and precision, and how it might vary across space, time, and different vegetation types. For a 113 k Ha burn area, we compared mod
Authors
Cara Applestein, Matthew J. Germino

Dammed water quality — Longitudinal stream responses below beaver ponds in the Umpqua River Basin, Oregon

Beaver-related restoration (BRR) has gained popularity as a means of improving stream ecosystems, but the effects are not fully understood. Studies of dissolved oxygen (DO) and water temperature, key water quality metrics for salmonids, have demonstrated improved conditions in some cases, but warming and decreased DO have been more commonly reported in meta-analyses. These results point to the con
Authors
John R. Stevenson, Jason B. Dunham, Steve M. Wondzell, Jimmy D. Taylor

Management and environmental factors associated with simulated restoration seeding barriers in sagebrush steppe

Adverse weather conditions, particularly freezing or drought, are often associated with poor seedling establishment following restoration seeding in drylands like the Great Basin sagebrush steppe (USA). Management decisions such as planting date or seed source could improve restoration outcomes by reducing seedling exposure to weather barriers. We simulated the effects of management and environmen
Authors
Stella M. Copeland, John B. Bradford, Stuart P. Hardegree, Daniel Rodolphe Schlaepfer, Kevin J Badik

The role of microtopography and resident species in post-disturbance recovery of arid habitats in Hawaiʻi

Habitat-suitability indices (HSI) have been employed in restoration to identify optimal sites for planting native species. Often, HSI are based on abiotic variables and do not include biotic interactions, even though similar abiotic conditions can favor both native and nonnative species. Biotic interactions such as competition may be especially important in invader-dominated habitats because invas
Authors
Stephanie G. Yelenik, Eli Rose, Susan Cordell, Michelle Victoria, James R. Kellner

Response of riparian vegetation to short- and long-term hydrologic variation

Increasing demand for river water now conflicts with an increasing desire to maintain riparian ecosystems. Efficiently managing river flows for riparian vegetation requires an understanding of the time scale of flow effects, but this information is limited by the absence of long-term studies of vegetation change in response to flow variation. To investigate the influence of short- and long-term fl
Authors
J. M. Friedman, Abigail M. Eurich, Gregor T. Auble, Michael L. Scott, Patrick B. Shafroth, Polly P Gibson