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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41763

Machine learned daily life history classification using low frequency tracking data and automated modelling pipelines: Application to North American waterfowl

BackgroundIdentifying animal behaviors, life history states, and movement patterns is a prerequisite for many animal behavior analyses and effective management of wildlife and habitats. Most approaches classify short-term movement patterns with high frequency location or accelerometry data. However, patterns reflecting life history across longer time scales can have greater relevance to species bi
Authors
Cory T. Overton, Michael L. Casazza, Joseph Bretz, Fiona McDuie, Elliott Matchett, Desmond Alexander Mackell, Austen Lorenz, Andrea Mott, Mark P. Herzog, Josh T. Ackerman

Using a multi-model ensemble approach to determine biodiversity hotspots with limited occurrence data in understudied areas: An example using freshwater mussels in México

Species distribution models (SDMs) are an increasingly important tool for conservation particularly for difficult-to-study locations and with understudied fauna. Our aims were to (1) use SDMs and ensemble SDMs to predict the distribution of freshwater mussels in the Pánuco River Basin in Central México; (2) determine habitat factors shaping freshwater mussel occurrence; and (3) use predicted occup
Authors
Alexander H. Kiser, Kevin S. Cummings, Jeremy S. Tiemann, Chase H. Smith, Nathan A. Johnson, Roel R. Lopez, Charles R. Randklev

Long-term effects of prescribed fire on large tree growth in mixed conifer forests at Lassen Volcanic National Park, California

Prescribed fire in dry coniferous forests of the western U.S. is used to reduce fire hazards. How large, old trees respond to these treatments is an important management consideration. Growth is a key indicator of residual tree condition, which can be predictive of mortality and response to future disturbance. Using a combination of long-term plot records and dendrochronological samples, we analyz
Authors
Zachary Wenderott, Phillip J. van Mantgem, Micah C. Wright, Calvin A. Farris, Rosemary L. Sherriff

Quantifying the conservation status and abundance trends of wildlife communities with detection-nondetection data

Effective conservation requires understanding species' abundance patterns and demographic rates across space and time. Ideally, such knowledge should be available for whole communities, as variation in species' dynamics can elucidate factors leading to biodiversity losses. However, collecting data to simultaneously estimate abundance and demographic rates is often prohibitively time-intensive and
Authors
Matthew T Farr, Timothy O O'Brien, Charles Yackulic, Elise F. Zipkin

Hybrid enrichment of adaptive variation revealed by genotype-environment associations in montane sedges

The role of hybridization in diversification is complex and may result in many possible outcomes. Not only can hybridization produce new lineages, but those lineages may contain unique combinations of adaptive genetic variation derived from parental taxa that allow hybrid-origin lineages to occupy unique environmental space relative to one (or both) parents. We document such a case of hybridizatio
Authors
Richard G.J. Hodel, Robert Massatti, L Lacey Knowles

Leading change with diverse stakeholders

The shift to holistic approaches to managing wildlife health, and the complex landscape of partners and stakeholders, has led to a focus on the development of leadership skills in addition to technical expertise. This chapter introduces key elements and core skills for successful cross-sectoral and transdisciplinary leadership that will help wildlife health practitioners effectively lead change to
Authors
Catherine Machalaba, Jonathan M. Sleeman

Flight characteristics forecast entry by eagles into rotor-swept zones of wind turbines

Operators of wind power facilities can mitigate wildlife mortality by slowing or stopping wind turbines (hereafter ‘curtail’) when birds are at an increased risk of collision. Some facility operators curtail when individual birds have flight characteristics (e.g. altitude, distance or relative bearing of a bird's flight path) that exceed some threshold value, but thresholds currently in use have n
Authors
Brian W. Rolek, Melissa A. Braham, Tricia A. Miller, Adam E. Duerr, Todd E. Katzner, Jennifer D. McCabe, Leah Dunn, Christopher J.W. McClure

Pollution and wildlife health

Pollution is a pervasive and growing threat to wildlife health. This chapter discusses two broad groups of pollution, those whose abatement could have immediate beneficial effects including light, air, and noise pollution, and those that will take relatively longer to address due to their environmental persistence or their continuing discharge. Whilst we are very good at detecting the presence of
Authors
Thierry M. Work

Estimating occupancy from autonomous recording unit data in the presence of misclassifications and detection heterogeneity

1. Autonomous Recording Units (ARUs) are now widely used to survey communities of species. These surveys generate spatially and temporally replicated counts of unmarked animals, but such data typically include false negatives and misclassified detections, both of which may vary across sites in proportion to abundance. These data challenges can bias estimates of occupancy, and the typical approach
Authors
Matt Clement, Andy Royle, Ronald Mixan

Fuel reduction treatments reduce modeled fire intensity in the sagebrush steppe

Increased fire size and frequency coupled with annual grass invasion pose major challenges to sagebrush (Artemisia spp.) ecosystem conservation, which is currently focused on protecting sagebrush community composition and structure. A common strategy for mitigating potential fire is to use fuel treatments that alter the structure and amount of burnable material, thus reducing fire behavior and cre
Authors
Lisa M. Ellsworth, Beth A. Newingham, Scott Shaff, C. F. Rick Williams, Eva K. Strand, Matt Reeves, David A. Pyke, Eugene W. Schupp, Jeanne C. Chambers

The researcher's lament: Why do they ignore my science?

The researcher's lament is shared by many environmental and conservation scientists who complain about the little support they receive for their research proposals during the review and selection process. Understandably, any hopes of having their anticipated scientific findings applied toward the formulation of environmental management decisions or natural resource policy action are shattered. The
Authors
Gustavo A. Bisbal

Quantitative method development to determine feed consumption using a dye

Although there are many methods to determine ingestion and absorption of aquafeeds, none exist that are simple, cost-effective, and quantitative and that can mark fish with a long-lasting, visible indicator. In addition to aquafeed development, selective baits are needed that can be used for aquatic invasive species removal efforts, including for Grass Carp Ctenopharyngodon idella. Bait incorporat
Authors
James J. Wamboldt, Justine Nelson, Linnea M Thomas, John Steiner, Jillian Hebert, Richard A. Erickson, Joel G. Putnam