Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 41894
Influence of filter pore size on composition and relative abundance of bacterial communities and select host-specific MST markers in coastal waters of southern Lake Michigan
Water clarity is often the primary guiding factor in determining whether a prefiltration step is needed to increase volumes processed for a range of microbial endpoints. In this study, we evaluate the effect of filter pore size on the bacterial communities detected by 16S rRNA gene sequencing and incidence of two host-specific microbial source tracking (MST) markers in a range of coastal waters fr
Authors
Muruleedhara Byappanahalli, Meredith B. Nevers, Dawn Shively, Cindy H Nakatsu, Julie L. Kinzelman, Mantha S. Phanikumar
The ten steps to responsible Inland fisheries in practice: Reflections from diverse regional case studies around the globe
Inland fisheries make substantial contributions to food security and livelihoods locally, regionally, and globally but their conservation and management have been largely overlooked by policy makers. In an effort to remedy this limited recognition, a cross-sectoral community of scientists, practitioners, and policy makers from around the world convened a high-level meeting in 2015 at the Food and
Authors
Steven J. Cooke, Elizabeth A. Nyboer, Abigail Bennett, Abigail J. Lynch, Dana M. Infante, Ian G. Cowx, Douglas Beard, Devin Bartley, Craig Paukert, Andrea J. Reid, Simon Funge-Smith, Edith Gondwe, Emmanuel Kaunda, John D. Koehn, Nicholas J. Souter, Gretchen L. Stokes, Leandro Castello, Nancy J. Leonard, Christian Skov, Soren Berg, William W. Taylor
Local climate adaptations in two ubiquitous Mojave Desert shrub species, Ambrosia dumosa and Larrea tridentata
Widely distributed species are often locally adapted to climate gradients across their ranges. But little is known about the patterns of intraspecific adaptation in desert shrubs.We examined the questions of local adaptation in multiple populations of two common shrub species of the winter-wet Mojave Desert in North America in a multiple common garden experiment. Plants were raised in the greenhou
Authors
Nathan A. Custer, Susan Schwinning, Lesley A. DeFalco, Todd C. Esque
Introduced mangroves along the coast of Moloka‘i, Hawai‘i may represent novel habitats for megafaunal communities
Mangrove forests are prevalent along tropical/subtropical coastlines and provide valuable ecosystem services including coastline stabilization, storm impact reduction, and enhanced coastal productivity. However, mangroves were absent from the Hawaiian Islands and their introduction to Moloka‘i in 1902 has provided an opportunity to examine their unique influence on coastal landscapes. Previous stu
Authors
Bryan A. Nakahara, Amanda Demopoulos, Yoshimi M. Rii, Rosanna A. Alegado, Kauaoa M.S. Fraiola, Craig R. Smith
Spatial and temporal distribution of radio-tagged Lost River (Deltistes luxatus) and shortnose (Chasmistes brevirostris) suckers in Clear Lake Reservoir and associated spawning tributaries, Northern California, 2015–17
Executive SummaryData from a multi-year radio telemetry study were used to assess seasonal distribution patterns for two long-lived, federally endangered catostomids across substantially different water conditions in Clear Lake Reservoir, northern California. Lost River (Deltistes luxatus) and shortnose (Chasmistes brevirostris) suckers, two species endemic to the Klamath Basin, were implanted wit
Authors
Nathan Banet, David A. Hewitt, Amari Dolan-Caret, Alta C. Harris
Evaluation of camera trap-based abundance estimators for unmarked populations
Estimates of species abundance are critical to understand population processes and to assess and select management actions. However, capturing and marking individuals for abundance estimation, while providing robust information, can be economically and logistically prohibitive, particularly for species with cryptic behavior. Camera traps can be used to collect data at temporal and spatial scales n
Authors
S M Amburgey, Amy A. Yackel Adams, B. Gardner, N.J. Hostetter, S.R. Siers, B.T. McClintock, Sarah J. Converse
Maintaining momentum for collaborative working groups in a post-pandemic world
Scientific progress depends in part on our ability to synthesize heterogeneous data and ideas into new models and paradigms. In environmental sciences, such synthesis has been particularly effective when conducted by collaborative working groups: diverse groups of researchers and practitioners brought together for a concentrated period of collaboration on key questions. Such work is often done at
Authors
Diane Srivastava, Marten Winter, Louis Gross, Jena Paul Metzger, Jill S. Baron, Nicolas Mouquet, Thomas Meagher, Ben Halpern, Valerio Pillar
Southwestern bats and their external bacteria
Bat species diversity within the United States is greatest in the Southwest, with approximately 30 species present. At least 16 of these bat species hibernate and are susceptible to white-nose syndrome (WNS), which is caused by the fungus Pseudogymnoascus destructans. Since 2006, millions of bats from 35 U.S. states and 7 Canadian provinces have died from WNS. In previous studies of external surfa
Authors
Ernest W. Valdez, Emily M. Johnson, Edward W. Strach, Patrick A. Lewis, William C Briggs, Nicole A. Caimi, Ara S. Winter, Diana E. Northup, Jennifer J.M. Hathaway
Ecological correlates of fecal corticosterone metabolites in female Greater Sage-Grouse (Centrococercus urophasianus)
Measurement of physiological responses can reveal effects of ecological conditions on
an animal and correlate with demographic parameters. Ecological conditions for many animal
species have deteriorated as a function of invasive plants and habitat fragmentation. Expansion
of juniper (Juniperus spp.) trees and invasion of annual grasses into sagebrush (Artemisia spp.)
ecosystems have contributed to
Authors
Jordan C. Rabon, Cassandra Nuñez, Peter S. Coates, Mark A. Ricca, Tracey N. Johnson
Toward climate change refugia conservation at an ecoregion scale
Climate change uncertainty poses serious challenges to conservation efforts. One emerging conservation strategy is to identify and conserve climate change refugia: areas relatively buffered from contemporary climate change that enable persistence of valued resources. This management paradigm may be pursued at broad scales by leveraging existing resources and placing them into a tangible framework
Authors
Cathleen Balantic, Andrea Adams, Shana Gross, Rachel Mazur, Sarah Sawyer, Jody Tucker, Marian Vernon, Claudia Mengelt, Jennifer Morales, James Thorne, Timothy Brown, Nicole Athearn, Toni Lyn Morelli
Twenty-five essential research questions to inform the protection and restoration of freshwater biodiversity
Freshwater biodiversity is declining at an unprecedented rate. Freshwater conservationists and environmental managers have enough evidence to demonstrate that action must not be delayed but have insufficient evidence to identify those actions that will be most effective in reversing the current trend.Here, the focus is on identifying essential research topics that, if addressed, will contribute di
Authors
Meagan Harper, Hebah S. Mejbel, Dylan Longert, Robin Abell, T. Douglas Beard, Joseph R. Bennett, Stephanie M. Carlson, William Darwall, Anthony Dell, Sami Domisch, David Dudgeon, Jörg Freyhof, Ian Harrison, Kathy A. Hughes, Sonja C. Jähnig, Jonathan M. Jeschke, Richard Lansdown, Mark Lintermans, Abigail Lynch, Helen M. R. Meredith, Sanjay Molur, Julian D. Olden, Steve J. Ormerod, Harmony Patricio, Andrea J. Reid, Astrid Schmidt-Kloiber, Michele Thieme, David Tickner, Eren Turak, Olaf L. F. Weyl, Steve J. Cooke
Responses of soil extracellular enzyme activities and bacterial community composition to seasonal stages of drought in a semiarid grassland
Extreme drought can strongly impact belowground communities and biogeochemical processes, including soil microbial community composition and extracellular enzyme activities (EEAs), which are considered key agents in ecosystem carbon (C) and nutrient cycling. However, our understanding of how seasonal timing of drought during the growing season affects soil microbial communities and their activity
Authors
Wenlan Gao, Sasha C. Reed, Seth M. Munson, Yichao Rui, Wenyuan Fan, Zhenzhen Zheng, Linfeng Li, Rongxiao Che, Kai Xue, Jianqing Du, Xiaoyong Cui, Yanfen Wang, Yanbin Hao