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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41894

Response of fish assemblages to restoration of rapids habitat in a Great Lakes connecting channel

Rapids habitats are critical spawning and nursery grounds for multiple Laurentian Great Lakes fishes of ecological importance such as lake sturgeon, walleye, and salmonids. However, river modifications have destroyed important rapids habitat in connecting channels by modifying flow profiles and removing large quantities of cobble and gravel that are preferred spawning substrates of several fish sp
Authors
A. Molina-Moctezuma, N. Godby, K. Kapuscinski, Edward F. Roseman, K. Skubik, A. Moerke

Integrating thermal infrared stream temperature imagery and spatial stream network models to understand natural spatial thermal variability in streams

Under a warmer future climate, thermal refuges could facilitate the persistence of species relying on cold-water habitat. Often these refuges are small and easily missed or smoothed out by averaging in models. Thermal infrared (TIR) imagery can provide empirical water surface temperatures that capture these features at a high spatial resolution (<1 m) and over tens of kilometers. Our study examine
Authors
Matthew R. Fuller, Joseph L. Ebersole, Naomi Detenbeck, Rochelle Labisoa, Peter Leinenbach, Christian E. Torgersen

Cohort strength and body size in co-occurring salmonids in a small stream network: Variation in space and time

Trout and salmon commonly coexist in stream networks. Exploring similarities and differences among species can help explain coexistence and invasive ability. Here, we describe spatial distribution, cohort strengths and size-at-age of three co-occurring species in a small stream network. Spatial distributions varied dramatically among species; native brook trout occupied all stream reaches, natural
Authors
Benjamin Letcher, Keith H. Nislow, Matthew O'Donnell, Andrew R. Whiteley, Jason A. Coombs, Todd L. Dubreuil

Experimental warming differentially affects vegetative and reproductive phenology of tundra plants

Rapid climate warming is altering Arctic and alpine tundra ecosystem structure and function, including shifts in plant phenology. While the advancement of green up and flowering are well-documented, it remains unclear whether all phenophases, particularly those later in the season, will shift in unison or respond divergently to warming. Here, we present the largest synthesis to our knowledge of ex
Authors
Courtney G. Collins, Sarah Claire Elmendorf, Robert D. Hollister, Greg Henry, Karin Clark, Anne Bjorkman, Isla H. Myers-Smith, Janet S. Prevéy, Isabel Ashton, Jakob J. Assmann, Juha Alatalo, Michele Carbognani, Chelsea Chisholm, Elisabeth J. Cooper, Forester Chiara, Ingibjorg Svala Jonsdottir, Kari Klanderud, Christopher Kopp, Carolyn Livensperger, Marguerite Mauritz, Jeremy May, Ulf Molau, Steven F. Oberbaeur, Emily Ogburn, Zoe Panchen, Alessandro Petraglia, Eric Post, Christian Rixen, Heidi Rodenhizer, Ted Schuur, Phillip Semenchuk, Jane G. Smith, Heidi Steltzer, Ørjan Totland, Marilyn Walker, Jeffrey Welker, Katharine N. Suding

Abundance of Gulf Coast Waterdogs (Necturus beyeri) along Bayou Lacombe, Saint Tammany Parish, Louisiana

Few ecological studies have been conducted on Gulf Coast Waterdogs (Necturus beyeri), and published studies have focused on relatively small stream sections of 125 m to 1.75 km. In 2015, we sampled 25 sites along a 13.4-km stretch of Bayou Lacombe (Saint Tammany Parish, Louisiana, USA) to better understand factors that may influence the distribution of Gulf Coast Waterdogs within streams. We check
Authors
Brad Glorioso, Hardin Waddle, Lindy J. Muse, Sidney T Godfrey

Population estimates and trends of three Maui Island-endemic Hawaiian Honeycreepers

Population monitoring is critical for informing the management and conservation of rare Hawaiian forest birds. In 2017, we used point-transect distance sampling methods to estimate population densities of birds on Haleakalā Volcano on east Maui island. We estimated the populations and ranges of three island-endemic Hawaiian honeycreepers, including the endangered ‘Ākohekohe (Palmeria dolei), the e
Authors
Seth Judge, Christopher C Warren, Richard J. Camp, Laura K Berthold, Hanna L Mounce, Patrick J. Hart, Ryan J. Monello

Identification of Aphanomyces invadans, the cause of epizootic ulcerative syndrome, in smallmouth bass (Micropterus dolomieu) from the Cheat River, West Virginia, USA

The oomycete Aphanomyces invadans (Saprolegniales, Oomycetes), the cause of epizootic ulcerative syndrome (EUS), is an OIE (World Organization for Animal Health) reportable pathogen, capable of infecting many fish species worldwide in both freshwater and estuarine environments (Iberahim et al. 2018). Since the discovery of EUS in Japan in 1971 (Egusa and Masuda 1971), it has spread globally and ca
Authors
Heather L. Walsh, Vicki S. Blazer, Patricia M. Mazik

Diet composition and body condition of polar bears (Ursus maritimus) in relation to sea ice habitat in the Canadian High Arctic

Polar bears (Ursus maritimus) rely on sea ice for hunting marine mammal prey. Declining sea ice conditions associated with climate warming have negatively affected polar bears, especially in the southern portion of their range. At higher latitudes, the transition from multi-year ice to thinner annual ice has been hypothesized to increase biological productivity and potentially improve polar bear f
Authors
Katie R. N. Florko, Gregory W. Thiemann, Jeffrey F. Bromaghin, Evan S. Richardson

Spatial ecology of invasive Burmese pythons in southwestern Florida

Understanding the spatial ecology of an invasive species is critical for designing effective control programs. Determining and quantifying home range estimates and habitat associations can streamline targeted removal efforts for wide-ranging, cryptic animals. The Burmese python (Python bivittatus) is a large-bodied constrictor snake with an established and expanding invasive population in southern
Authors
Ian A. Bartoszek, Brian J. Smith, Robert Reed, Kristen Hart

Confirmed cases of Ophidiomycosis in museum specimens from the USA as early as 1945, United States

Ophidiomycosis represents a conservation threat to wild snake populations. The disease was reported in North America early in the 21st century, but the history of ophidiomycosis has not been investigated. We examined museum specimens and confirmed cases of ophidiomycosis >50 years before the disease’s reported emergence.
Authors
Jeffrey M. Lorch, Steven J. Price, Julia S. Lankton, Andrea N. Drayer

Hydropeaking intensity and dam proximity limit aquatic invertebrate diversity in the Colorado River Basin

River biodiversity is threatened globally by hydropower dams, and there is a need to understand how dam management favors certain species while filtering out others. We examined aquatic invertebrate communities within the tailwaters 0–24 km downstream of seven large hydropower dams in the Colorado River Basin of the western United States. We quantified aquatic invertebrate dominance, richness, abu
Authors
Erin Abernathy, Jeffrey Muehlbauer, Theodore Kennedy, Jonathan D. Tonkin, Richard Van Driesche, David A. Lytle

Migration patterns and wintering distribution of common loons breeding in the Upper Midwest

Identification of geographic linkages among breeding, migratory and wintering common loon Gavia immer populations is needed to inform regional and national conservation planning efforts and compensation of loons lost during marine oil spill events. Satellite telemetry and archival geolocator tags were used to determine the migration patterns and wintering locations of breeding adult and young of t
Authors
Kevin P. Kenow, Luke J. Fara, Steven C. Houdek, Brian R. Gray, Darryl J. Heard, Michael W. Meyer, Timothy J. Fox, Robert Kratt, Scott L. Ford, Anette Gendron-Fitzpatrick, Carrol L. Henderson