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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 171101

Freshwater mussel viromes increase rapidly in diversity and abundance when hosts are released from captivity into the wild

Freshwater mussels create habitat, filter water, and enhance food webs, but they are also among the world’s most imperiled taxa. Conservation efforts largely rely on captive propagation in which mussels are grown in protected aquaculture environments (hatcheries) for later release. Recent evidence has highlighted the importance of pathogens in population losses of freshwater mussels. In response t
Authors
Jordan C. Richard, Tim W. Lane, Rose E. Agbalog, Sarah Colletti, Tiffany Leach, Christopher D. Dunn, Nathan Roy Bollig, Addison R. Plate, Joseph T. Munoz, Eric M. Leis, Susan Knowles, Isaac Standish, Diane L. Waller, Tony L. Golberg

Gulf Stream intrusion and deep current upwelling drive dynamic patterns of temperature and food supply within cold-water coral reefs

One of the most significant features of the Northwest Atlantic, the Gulf Stream influences high magnitude environmental fluctuations in deep habitats across the South Atlantic Bight. Amid this variability, the Blake Plateau harbors extensive reefs formed by cold-water corals that were previously assumed to rely on narrow ranges of temperature, currents, and particulate supply. A benthic lander col
Authors
Jane V. Carrick, Furu Mienis, Erik E. Cordes, Amanda Demopoulos, Andrew J. Davies

Substrate Enhancement Pilot Project—Monitoring summary and evaluation, Kootenai River, Idaho, 2012–22

To assess changes in substrate conditions and the efficacy of artificially placed substrates at select sites on the Kootenai River near Bonners Ferry, Idaho, the U.S. Geological Survey, in cooperation with the Kootenai Tribe of Idaho, completed repeat bathymetric, velocimetric, and underwater videography surveys. Collectively, three project sites throughout the Kootenai River make up the Substrate
Authors
Taylor J. Dudunake

Methane emissions associated with bald cypress knees across the Mississippi River Alluvial Valley

In freshwater forested wetlands, bald cypress knees (Taxodium distichum (L.) Rich.) have the potential to emit large amounts of methane (CH4), but only a few studies have examined their greenhouse gas contribution. In this study, we measured CH4 fluxes associated with cypress knees across various climate and flooding gradients of the Mississippi River Alluvial Valley in southcentral United States.
Authors
Melinda Martinez, Robert Bordelon, Beth Middleton, Jorge A. Villa, Hojeong Kang, Inyoung Jang

Wave runup and total water level observations from time series imagery at several sites with varying nearshore morphologies

Coastal imaging systems have been developed to measure wave runup and total water level (TWL) at the shoreline, which is a key metric for assessing coastal flooding and erosion. However, extracting quantitative measurements from coastal images has typically been done through the laborious task of hand-digitization of wave runup timestacks. Timestacks are images created by sampling a cross-shore ar
Authors
Mark L. Buckley, Daniel Buscombe, Justin J. Birchler, Margaret Louise Palmsten, Eric Swanson, Jenna A. Brown, Michael Christopher Itzkin, Curt Storlazzi, Shawn R. Harrison

The skin I live in: Pathogenesis of white-nose syndrome of bats

The emergence of white-nose syndrome (WNS) in North America has resulted in mass mortalities of hibernating bats and total extirpation of local populations. The need to mitigate this disease has stirred a significant body of research to understand its pathogenesis. Pseudogymnoascus destructans, the causative agent of WNS, is a psychrophilic (cold-loving) fungus that resides within the class Leotio
Authors
Marcos Isidoro-Ayza, Jeffrey M. Lorch, Bruce S. Klein

Supporting climate adaptation for rural Mekong River Basin communities in Thailand

Climate change impacts on large river basins, such as the Mekong River Basin (MRB), are complex due to shared governance and interconnected socioeconomic areas, making them highly vulnerable to change. The MRB, spanning six countries including Thailand, is crucial for the food and economic security of > 60 million people. However, in 2021, Thailand was ranked as the 9th highest risk country affect
Authors
Holly Susan Embke, Abigail Lynch, T. Douglas Beard,

Evolution and current state of continuous volcano gravimetry

Most processes controlling volcanic activity involve underground mass redistribution (e.g., magma accumulation or withdrawal). Because of its unique ability to provide direct information on subsurface mass/density changes over time, gravimetry has important advantages over other volcano-monitoring techniques. As an example, if pre-eruptive magma accumulation occurs in voids, surface uplift or seis
Authors
Daniele Carbone, Michael P. Poland, Filippo Greco, Danilo Contrafatto, Alfio Messina, Luca Timoteo Mirabella

From field station to forecast: Managing data at the Alaska Volcano Observatory

The Alaska Volcano Observatory (AVO) uses multidisciplinary data to monitor and study dozens of active and potentially active volcanoes. Here, we provide an overview of internally and externally generated data types, tools and resources used in their management, and challenges faced. Data sources include the following: (1) a multiparameter (seismic, infrasound, GNSS, web cameras) ground-based moni
Authors
Michelle L. Coombs, Cheryl Cameron, Hannah R. Dietterich, Eleanor Boyce, Aaron Wech, Ronni Grapenthin, Kristi L. Wallace, Thomas Parker, Taryn Lopez, Scott Crass, David Fee, Matthew M. Haney, Dane M. Ketner, Matthew W. Loewen, John J. Lyons, Jenny Sha Nakai, John Power, Steven M Botnick, Israel Brewster, Max L. Enders, Dain Harmon, Peter J. Kelly, Michael J. Randall

Dynamic occupancy modelling of Asian elephants (Elephas maximus) reveals increasing landscape use in Nepal

Large mammals with general habitat needs can persist throughout mixed used landscapes, however, human-wildlife conflict frequently leads to their restriction to protected areas. Conservation efforts, especially for reducing conflicts with humans, can enhance tolerance of humans towards species like Asian elephants (Elephas maximus) in human-dominated landscapes. Here, we examine how elephant use i
Authors
Ashok Kumar Ram, Babu Ram Lamichhane, Naresh Subedi, Nabin Kumar Yadav, Ajay Karki, Bivash Pandav, Cory Brown, Top B. Khatri, Charles Yackulic

Trees have similar growth responses to first-entry fires and reburns following long-term fire exclusion

Managing fire ignitions for resource benefit decreases fuel loads and reduces the risk of high-severity fire in fire-suppressed dry conifer forests. However, the reintroduction of low-severity wildfire can injure trees, which may decrease their growth after fire. Post-fire growth responses could change from first-entry fires to reburns, as first-entry fires reduce fuel loads and the vulnerability
Authors
Kevin G. Willson, Ellis Margolis, Mathew D. Hurteau

Will there be water? Climate change, housing needs, and future water demand in California

Climate change in California is expected to alter future water availability, impacting water supplies needed to support future housing growth and agriculture demand. In groundwater-dependent regions like California's Central Coast, new land-use related water demand and decreasing recharge is already stressing depleted groundwater basins. We developed a spatially explicit state-and-transition simul
Authors
Tamara Wilson, Paul Selmants, Ryan M Boynton, James H. Thorne, N. Van Schmidt, Timothy Thomas
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