All Publications

In this report, we apply the stream salmonid simulator (S3) to coho salmon (Oncorhynchus kisutch) in the Klamath River Basin by extending the original model to account for life history and disease dynamics specific to coho salmon. This version of S3 includes tracking of three separate life-history strategies representing the different time periods and ages at which fish leave natal tributaries suc

Population monitoring is essential to management and conservation efforts for migratory birds, but traditional low-altitude aerial surveys with human observers are plagued by individual observer bias and risk to flight crews. Aerial surveys that use remote sensing can reduce bias and risk, but manual counting of wildlife in imagery is laborious and may be cost-prohibitive. Therefore, automated met

Tellurium-bearing low-sulfidation epithermal Au-Ag deposits are significant producers of gold, silver, and potentially strategic elements if mineral processing methods are optimized for recovery. Although these deposits are generally related to alkaline magmatism, our study documents an unusual occurrence of Te-rich low-sulfidation epithermal systems in the North Heilongjiang Belt in northeast Chi

The horizontal‐to‐vertical spectral ratios from microtremor (mHVSR) data obtained at 196 seismic stations in California are used to evaluate three alternative microtremor‐based proxies for site amplification for use in ground‐motion models (GMMs): the site fundamental period (⁠f0⁠), the period‐dependent amplitude of the mHVSR(T), and the normalized amplitude of the mHVSR(T). The alternative parame

Warming temperatures and increasing disturbance by wildfire and extreme weather events is driving permafrost change across northern latitudes. The state of permafrost varies widely in space and time, depending on landscape, climate, hydrologic, and ecological factors. Despite its importance, few approaches commonly measure and monitor the changes in deep (>1 m) permafrost conditions with high spat

One Health involves interdisciplinary collaboration to improve, protect, and preserve the health of humans, wildlife, and ecosystems, and advocates for unified approaches to One Health challenges (Buttke et al. 2015). Here, we focus on a One Health challenge of nearly global distribution: Yersinia pestis, the flea-borne bacterial agent of plague. The bacterium poses a significant risk to humans an

Often referred to as “mudflows,” debris flows are a type of landslide made up of a rapidly moving mixture of dirt, rocks, trees, and water (and sometimes ash) that start on a hillside and travel downvalley. They can easily overflow channels and severely damage houses, vehicles, or other structures. Areas burned by wildfires are especially susceptible to these hazards, which can be triggered by sto

The Navajo (N) aquifer is an extensive aquifer and the primary source of groundwater in the 5,400-square-mile Black Mesa area in northeastern Arizona. Water availability is an important issue in the Black Mesa area because of the arid climate, past industrial water use, and continued water requirements for municipal use by a growing population. Precipitation in the area typically ranges from less

Niobium, often classified as critical, is typically embedded within steels essential for infrastructure and transportation. Most niobium-consuming countries are import-dependent on primary stage niobium, meaning traditional material flow analysis, which often excludes critical commodities embedded within products of large-scale industries, would miss important flows in the fabrication and manufact

Rapid Arctic environmental change affects the entire Earth system as thawing permafrost ecosystems release greenhouse gases to the atmosphere. Understanding how much permafrost carbon will be released, over what time frame, and what the relative emissions of carbon dioxide and methane will be is key for understanding the impact on global climate. In addition, the response of vegetation in a warmin

Informed and effective management of emerging infectious diseases can be improved by a clear understanding of host–pathogen–environment interactions. Impacts of the seasonal environment on pathogen dynamics and host responses are poorly described in most reptile host–fungal pathogen systems. Here, we describe seasonal patterns of ophidiomycosis, a disease caused by the fungus Ophidiomyces ophidiic

Pyrethroids, a class of commonly used insecticides, are frequently detected in aquatic environments, including estuaries. The influence that salinity has on organism physiology and the partitioning of hydrophobic chemicals, such as pyrethroids, has driven interest in how toxicity changes in saltwater compared to freshwater. Early life exposures in fish to pyrethroids cause toxicity at environmenta