Book Chapters

Control of invasive species is a critical component of conservation biology given the catastrophic damage that they can cause to the ecosystems they invade. This is particularly evident with sea lamprey (Petromyzon marinus) in the Laurentian Great Lakes. Native to the Atlantic Ocean, the sea lamprey's ability to osmoregulate in fresh water, its wide thermal tolerance, generalist diet, and high fec

Synergistic interactions between geologic structures and topography have long been recognized to reflect numerous Earth processes and rock properties over time. It was not until the advent of plate tectonics in the midtwentieth century that researchers began to view the nature of the northern Cordillera orogen as a quilt of foreign pieces of crust or “suspect terranes”. The Alaska Range shows comp

The aim of biological assessments (or bioassessments) is to provide decision makers and managers the scientific information and tools needed to protect and restore aquatic life. Biological assessments typically include several critical elements, including development of ecological indicators, indices of ecological status, benchmarks by which to gauge impairment, ways to identify the stressors caus

This chapter focuses on meeting the need to produce neural network outputs that are physically consistent and also express uncertainties, a rare combination to date. It explains the effectiveness of physics-guided architecture - long-short-term-memory (PGA-LSTM) in achieving better generalizability and physical consistency over data collected from Lake Mendota in Wisconsin and Falling Creek Reserv

This article gives an overview of the heat fluxes between lakes and their environment. The heat budget of most lakes is dominated by heat fluxes at the lake surface, especially shortwave radiation, incoming and outgoing longwave radiation, and the latent heat flux. The seasonality of these fluxes is the most important driver for seasonal mixing processes in lakes. Changes in heat fluxes and the re

This chapter introduces a framework for combining scientific knowledge of physics-based models with neural networks to advance scientific discovery. It explains termed physics-guided neural networks (PGNN), leverages the output of physics-based model simulations along with observational features in a hybrid modeling setup to generate predictions using a neural network architecture. Data science ha

This chapter presents a physics-guided recurrent neural network model (PGRNN) for predicting water temperature in lake systems. Standard machine learning (ML) methods, especially deep learning models, often require a large amount of labeled training samples, which are often not available in scientific problems due to the substantial human labor and material costs associated with data collection. M

To understand the processes affecting the distribution and cycles of particulates, pollutants, nutrients, and organisms in estuaries, it is insufficient to focus solely on the biological and chemical aspects of the processes. Water sources and movements (e.g. evaporation, precipitation, riverine discharge, submarine ground water discharge, wetland hydrology, and tidal exchange) as well as other hy

Locomotion is the act and process of moving from place to place, which is fundamental to the life history of all mobile organisms. While the field of biomechanics encompasses the study of the physical constraints of what animals are capable of, ecological contexts require an integrated view that includes ecology and behavior. This chapter provides an overview of some of the areas where locomotion

No abstract available.

Headwater streams of the Pacific Northwest of North America are home to 52 amphibian species, spanning a diversity of taxa and life histories. Headwater stream-associated amphibians occur both within coldwater-stream channels and throughout adjacent riparian habitat, reflective of the important role of old-growth forests in providing cool, moist microclimates for these sensitive species. Forests o

The Shublik Formation (Middle and Upper Triassic) is a mixed siliciclastic-carbonate-phosphatic unit in northern Alaska. It generated oil found in Prudhoe Bay and other accumulations and is a prospective self-sourced resource play on Alaska’s North Slope. Its distal, deeper-water equivalent—the Otuk Formation—consists largely of radiolarian chert, mudstone, and limestone and contains potential gas