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Update on U.S. Geological Survey Fundamental Science Practices

The U.S. Geological Survey (USGS) Fundamental Science Practices (FSP) are a set of standard principles fundamental to how USGS conducts and carries out its science activities and how resulting information products and data are reviewed, approved, and released. These policies, practices, philosophical premises, and operational principles serve as the foundation for all USGS research and monitoring

Invaders at the doorstep: Using species distribution modeling to enhance invasive plant watch lists

Watch lists of invasive species that threaten a particular land management unit are useful tools because they can draw attention to invasive species at the very early stages of invasion when early detection and rapid response efforts are often most successful. However, watch lists typically rely on the subjective selection of invasive species by experts or on the use of spotty occurrence records.
Authors
Catherine S. Jarnevich, Peder Engelstad, Jillian LaRoe, Brandon Hays, Terri Hogan, Jeremy Jirak, Ian Pearse, Janet S. Prevéy, Jennifer Sieraki, Annie Simpson, Jess Wenick, Nicholas Young, Helen Sofaer

Mismatch between conservation status and climate change sensitivity leaves some anurans in the United States unprotected

Species vulnerable to climate change face increased extinction risk, but many sensitive species may be overlooked due to limited data and exclusion from vulnerability assessments. Intrinsic sensitivity, or the inherent risk of species to environmental change due to biological factors, can be assessed with widely available data and may address gaps in multispecies vulnerability assessments. Species
Authors
Traci P. DuBose, Chloe E. Moore, Samuel Silknetter, Abigail Benson, Tess Alexander, Grace O'Malley, Meryl C. Mims

Methods for evaluating Gap Analysis Project habitat distribution maps with species occurrence data

The National Gap Analysis Project created species habitat distribution models for all terrestrial vertebrates in the United States to support conservation assessments and explore patterns of species richness. Those models link species to specific habitats throughout the range of each species. For most vertebrates, there are not enough occurrence data to drive inductive, range-wide species habitat
Authors
Matthew J. Rubino, Alexa McKerrow, Nathan M. Tarr, Steven G. Williams

Community for data integration 2020 annual report

The Community for Data Integration is a community of practice whose purpose is to advance the data integration capabilities of the U.S. Geological Survey. In fiscal year 2020, the Community for Data Integration held 11 monthly forums, facilitated 13 collaboration areas, and supported 13 projects. The activities supported the broad U.S. Geological Survey priority of producing building blocks for do
Authors
Leslie Hsu, Amanda N. Liford, Grace C. Donovan

Tick abundance, diversity and pathogen data collected by the National Ecological Observatory Network

Cases of tick-borne diseases have been steadily increasing in the USA, owing in part to tick range expansion, land cover and associated host population changes, and habitat fragmentation. However, the relative importance of these and other potential drivers remain poorly understood within this complex disease system. Ticks are ectotherms with multi-host lifecycles, which makes them sensitive to ch
Authors
S. H. Paull, K. M. Thibault, Abigail Benson

Credit where credit is due

Credit is the currency of science. Scientists are evaluated and promoted in their jobs and professional communities on the basis of their recognized contributions to science. Unlike a financial contribution, a scientific contribution is difficult to measure. Traditionally, credit for scientific contributions has been given through authorship and citations in scientific literature as well as awards
Authors
Mark A. Parsons, Daniel S. Katz, Madison Langseth, Hampapuram Ramapriyan, Sarah Ramdeen

Credit where credit is due

Credit is the currency of science. Scientists are evaluated and promoted in their jobs and professional communities on the basis of their recognized contributions to science. Unlike a financial contribution, a scientific contribution is difficult to measure. Traditionally, credit for scientific contributions has been given through authorship and citations in scientific literature as well as awards
Authors
Mark A. Parsons, Daniel S. Katz, Madison Langseth, Hampapuram Ramapriyan, Sarah Ramdeen

Accessibility of environmental data for sharing: The role of UX in large cyberinfrastructure projects

Incorporating user experience (UX) testing when creating research cyberinfrastructure is often overlooked, but if left too late, the cost of retrofitting is considerable, and the very clients the cyberinfrastructure was built to serve may be lost. Successfully integrating UX testing into the product development cycle can be difficult but rewarding. This paper describes how UX evaluations were inco
Authors
Rachel Volentine, Alison Specht, Suzie Allard, Mike Frame, Rachael Hu, Lisa Zolly

Biology: Integrating core to essential variables (Bio-ICE) task team report for hard corals

The Interagency Ocean Observation Committee (IOOC) is chartered by the White House Office of Science and Technology Policy (OSTP) Subcommittee on Ocean Science and Technology (SOST). The purpose of the IOOC is to advise, assist, and make recommendations to the SOST on matters related to ocean observations via task teams such as the Biology - Integrating Core to Essential Variables (Bio-ICE) task t
Authors
E. K. Towle, Abigail Benson, Matt Biddle, Sarah Bingo, Kaitlyn Brucker, Gabrielle Canonico, Maggie Chory, Kruit Desai, Masha Edmondson, Miguel Figuerola, Christina Horstmann, Susan K Jackson, Jen Koss, J. Landrum, Kathryn Lohr, Laura Lorenzoni, Anderson Mayfield, Brian Melzin, Frank Muller-Karger, Sarah O'Conner, Deb Santavy, Curt Storlazzi, Anna Toline, Juan Torres-Perez, Kimberly K. Yates

Using fish community and population indicators to assess the biological condition of streams and rivers of the Chesapeake Bay watershed, USA

The development of indicators to assess relative freshwater condition is critical for management and conservation. Predictive modeling can enhance the utility of indicators by providing estimates of condition for unsurveyed locations. Such approaches grant understanding of where “good” and “poor” conditions occur and provide insight into landscape contexts supporting such conditions. However, as a
Authors
Kelly O. Maloney, Kevin P. Krause, Matthew Joseph Cashman, Wesley M. Daniel, Benjamin Paul Gressler, Daniel J. Wieferich, John A. Young

Ten simple rules for creating a scientific web application

The use of scientific web applications (SWApps) across biological and environmental sciences has grown exponentially over the past decade or so. Although quantitative evidence for such increased use in practice is scant, collectively, we have observed that these tools become more commonplace in teaching, outreach, and in science coproduction (e.g., as decision support tools). Despite the increased
Authors
Jessica Leigh Burnett, Renee Dale, Chung Yi Hou, Gabriela Palomo-Muñoz, Kaitlin Stack-Whitney, Steven Aulenbach, R. Sky Bristol, Denis Valle, Tristan Wellman