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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. **Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 4351

Acoustic tag retention and tagging mortality of juvenile cisco Coregonus artedi

Release of hatchery-reared juvenile cisco (Coregonus artedi) is an important tool for recovering Great Lakes populations, but post-release survival is unknown. Telemetry using small acoustic tags provides opportunities to assess the efficacy of hatchery-reared fish releases. However, better understanding of the tolerance of juvenile cisco to acoustic tags is needed. Juvenile cisco mortality and ta
Authors
James E. McKenna, Suresh Sethi, Grant Marvin Scholten, Jeremy W. Kraus, Marc Chalupnicki

The American Kestrel (Falco sparverius) genoscape: Implications for monitoring, management, and subspecies boundaries

Identifying population genetic structure is useful for inferring evolutionary process and comparing the resulting structure with subspecies boundaries can aid in species management. The American Kestrel (Falco sparverius) is a widespread and highly diverse species with 17 total subspecies, only 2 of which are found north of U.S./Mexico border (F. s. paulus is restricted to southeastern United Stat
Authors
K. C. Ruegg, M. Brinkmeyer, C. M. Bossu, R. Bay, E. C. Anderson, Clint W. Boal, R. D. Dawson, A. Eschenbauch, C. J. W. McClure, K. E. Miller, L. Morrow, J. R. Morrow, M. D. Oleyar, B. Ralph, S. Schulwitz, T. Swem, J. F. Therrien, Rich Van Buskirk, T. B. Smith, J. A. Heath

Dynamic Energy Budget modelling to predict eastern oyster growth, reproduction, and mortality under river management and climate change scenarios

Eastern oysters growing in deltaic Louisiana estuaries in the northern Gulf of Mexico must tolerate considerable salinity variation from natural climate variability (e.g., rainfall and stream run-off pushing isohalines offshore; tropical storms pushing isohalines inshore) and man-made diversions and siphons releasing freshwater from the Mississippi River. These salinity variations are predicted to
Authors
Romain Lavaud, Megan La Peyre, Justic Dubravko, Jerome F. La Peyre

Climate change may cause shifts in growth and instantaneous natural mortality of American Shad throughout their native range

American Shad Alosa sapidissima is an anadromous species with populations ranging along the U.S. Atlantic coast. Past American Shad stock assessments have been data limited and estimating system-specific growth parameters or instantaneous natural mortality (M) was not possible. This precluded system-specific stock assessment and management due to reliance on these parameters for estimating other p
Authors
Erin K. Gilligan, Daniel S. Stich, Katherine E. Mills, Michael M. Bailey, Joseph D. Zydlewski

PumaPlex100: An expanded tool for puma SNP genotyping with low-yield DNA

The original PumaPlex is a high-throughput assay developed to genotype 25 single nucleotide polymorphisms (SNPs) in pumas (Puma concolor). Here, we describe the development of PumaPlex100 – an expanded version of the original assay that now genotypes > 100 SNPs. We tested 142 candidate SNPs and developed a panel of 101 polymorphic loci, which are spread across four multiplexes and suitable for gen
Authors
John A. Erwin, Robert R. Fitak, Melanie Culver

Embracing ensemble species distribution models to inform at-risk species status assessments

Conservation planning depends on reliable information regarding the geographic distribution of species. However, our knowledge of species' distributions is often incomplete, especially when species are cryptic, difficult to survey, or rare. The use of species distribution models has increased in recent years and proven a valuable tool to evaluate habitat suitability for species. However, practitio
Authors
C. Ramirez-Reyes, M. Nazeri, Garrett Street, D. T. Jones-Ferrand, Francisco Vilella, K. O. Evans

Evidence of successful river spawning by lake trout (Salvelinus namaycush) in the lower Niagara River, Lake Ontario

Restoration of a wild-produced lake trout Salvelinus namaycush population in Lake Ontario has not been successful despite the adult population often meeting or exceeding restoration targets. Lack of high-quality spawning habitat in Lake Ontario is suggested as one impediment to recruitment of wild lake trout, although the quantity and location of spawning habitat is poorly understood. If high-qual
Authors
Alexander Gatch, Dimitry Gorsky, Zy Biesinger, Eric Bruestle, Kelley Lee, Curt Karboski, Meredith L. Bartron, Tyler Wagner

Investigating the morphological and genetic divergence of arctic char (Salvelinus alpinus) populations in lakes of arctic Alaska

Polymorphism facilitates coexistence of divergent morphs (e.g., phenotypes) of the same species by minimizing intraspecific competition, especially when resources are limiting. Arctic char (Salvelinus sp.) are a Holarctic fish often forming morphologically, and sometimes genetically, divergent morphs. In this study, we assessed the morphological and genetic diversity and divergence of 263 individu
Authors
Stephen L. Klobucar, Jessica A. Rick, Elizabeth G. Mandeville, Catherine E. Wagner, Phaedra E. Budy

Demography and loss of genetic diversity in two insular populations of the bobcat (Lynx rufus)

Among felids worldwide, only 6 of 38 species have stable or increasing populations, and most felid species are threatened by anthropogenic influences, especially habitat loss and fragmentation. We documented changes in genetic diversity in an isolated, reintroduced population of bobcats on Cumberland Island (CUIS), Georgia, USA, compared to another bobcat population on Kiawah Island, South Carolin
Authors
Cassandra M. Miller-Butterworth, Duane R. Diefenbach, Jessie E. Edson, Leslie A. Hansen, James D. Jordan, Tess M. Gingery, Amy L. Russell

Survival of greater Sage-Grouse broods: Survey method affects disturbance and age-specific detection probability

Investigators rely on brood surveys to estimate annual fecundity of game birds. However, investigators often do not account for factors that influence brood detection probability nor rarely document how much females and their broods are disturbed (flush rates) during surveys, which could lead to biased survival estimates. We used 45 radio-tagged female Greater Sage-Grouse (Centrocercus urophasianu
Authors
Ian P. Riley, Courtney J. Conway, B. S. Stevens, S. Roberts

Nest microclimate and limits to egg viability explain avian life-history variation across latitudinal gradients

Variation in life-history strategies is central to our understanding of population dynamics and how organisms adapt to their environments. Yet, we lack consensus regarding the ecological processes that drive variation in traits related to reproduction and survival. For example, we still do not understand the cause of two widespread inter- and intraspecific patterns: 1) the ubiquitous positive asso
Authors
Carl G. Lundblad, Courtney J. Conway

Long-term salinity change and growth of the harmful alga, Prymnesium parvum

Prymnesium parvum is a euryhaline, toxin-producing microalga. Although its abundance in inland waters and growth potential in the laboratory is reduced at high salinity (>20), the ability of inland strains to adjust their growth after long-term residence in high salinity is uncertain. An inland strain of P. parvum maintained at salinity of 5 in modified artificial seawater medium (ASM-5) was subje
Authors
Emily T. Richardson, Reynaldo Patiño
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