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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. **Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 4348

Biotic and abiotic determinants of finescale dace distribution at the southern edge of their range

AimThe factors that set range limits for animal populations can inform management plans aimed at maintaining regional biodiversity. We examine abiotic and biotic drivers of the distribution of finescale dace (Chrosomus neogaeus) in two Great Plains basins to identify limiting factors for a threatened freshwater fish population at the edge of their range.LocationGreat Plains, Nebraska, South Dakota
Authors
Evan C. J. Booher, Annika W. Walters

Retention of passive integrated transponder tags in a small-bodied catfish

Members of the freshwater catfishes (order Siluriformes) are capable of transintestinal expulsion of foreign bodies, including internally implanted tags, which can bias movement and survival estimates. We evaluated long-term (120-week) retention rates of passive integrated transponder (PIT) tags in a laboratory setting to assess potential tag loss in Stonecat Noturus flavus. The PIT tags were surg
Authors
Timothy W. D’Amico, Dana L. Winkelman, Tyler R. Swarr, Christopher A. Myrick

Second fin ray shows promise for estimating ages of juvenile but not adult Lake Sturgeon

The first marginal pectoral fin ray (fin spine) is the most common structure used for estimating the age of sturgeons, including Lake Sturgeon Acipenser fulvescens. However, conflicting results from studies on the effects of fin spine removal have made some managers hesitant about the practice. We investigated whether the second pectoral fin ray, which can be removed in a less invasive procedure,
Authors
Lisa K. Izzo, Donna L. Parrish, Gayle Barbin Zydlewski, Ryan P. Koenigs

Sex-specific behaviors of hunted mule deer during rifle season

Animal populations face increased threats to mobility and access to critical habitat from a variety of human disturbances including roads, residential development, agriculture, and energy development. Disturbance from human hunting is known to alter habitat use in ungulates, but recent work suggests that hunting may also trigger the onset of migration. Whether this holds true across ungulate speci
Authors
Patrick A. Rodgers, Hall Sawyer, Tony W. Mong, Sam Stephens, Matthew Kauffman

Incomplete bioinformatic filtering and inadequate age and growth analysis lead to an incorrect inference of harvested-induced changes

Understanding the evolutionary impacts of harvest on fish populations is important for informing fisheries management and conservation and has become a growing research topic over the last decade. However, the dynamics of fish populations are highly complex, and phenotypes can be influenced by many biotic and abiotic factors. Therefore, it is vital to collect robust data and explore multiple alter
Authors
Wesley Larson, Daniel A. Isermann, Zachary S. Feiner

Evidence for maternal style among adult female dolphins when sharing pectoral fin contacts with their calves

Adult bottlenose dolphins share pectoral fin contacts (PFC) to manage their social relationships but less is known about how mothers share PFC with their calves. Using a dataset collected over 16 years, we analyzed how 10 matrilines, including three second generation female dolphins in a maternal role, used PFC with their pre-weaned calves. Mothers had different rates of initiation with their calv
Authors
Kathleen M. Dudzinski, Christine Ribic, Heather M. Manitzas-Hill, Teresa T. Bolton

Learning augmented methods for matching: Improving invasive species management and urban mobility

With the success of machine learning, integrating learned models into real-world systems has become a critical chal- lenge. Naively applying predictions to combinatorial opti- mization problems can incur high costs, which has motivated researchers to consider learning augmented algorithms that can make use of faulty or incomplete predictions. Inspired by two matching problems in computational sust
Authors
Johan Bjorck, Qinru Shi, Carrie Brown-Lima, Jennifer Dean, Angela K. Fuller, Carla Gomes

Nuclear eDNA estimates population allele frequencies and abundance in experimental mesocosms

Advances in environmental DNA (eDNA) methodologies have led to improvements in the ability to detect species and communities in aquatic environments, yet the majority of studies emphasize biological diversity at the species level by targeting variable sites within the mitochondrial genome. Here, we demonstrate that eDNA approaches also have the capacity to detect intraspecific diversity in the nuc
Authors
Kara J. Andres, Suresh Sethi, David M. Lodge, Jose Andres

Ensemble species distribution model identifies survey opportunities for at-risk bearded beaksedge (Rhynchospora crinipes) in the southeastern United States

Locating additional occurrences of at-risk species can inform assessments of their status and conservation needs (including potential legal protections). The perennial bearded beaksedge (Rhynchospora crinipes) ranges from Mississippi to North Carolina, but known occurrences are limited. Because of the species' apparent rarity, a model to identify areas with suitable habitat conditions for the spec
Authors
C. Ramirez-Reyes, G. Street, Francisco Vilella, T. Jones-Farrand, M. S. Wiggers, K. O. Evans

Detecting resource limitation in a large herbivore population is enhanced with measures of nutritional condition

Resource limitation at the population level is a function of forage quality and its abundance relative to its per capita availability, which in turn, determines nutritional condition of individuals. Effects of resource limitation on population dynamics in ungulates often occur through predictable and sequential changes in vital rates, which can enable assessments of how resource limitation influen
Authors
Brendan A. Oates, Kevin L. Monteith, Jacob R. Goheen, Jerod A. Merkle, Gary Fralick, Matthew Kauffman

Estimating detection and occupancy coefficients for the Pacific Islands coral reef fish species

The data-limited stock assessment models used to monitor the status of coral reef fish species in the Western Pacific region are dependent upon accurate estimates of standing stock biomass generated from underwater visual surveys of reefs. However, the imperfect detection of and variable occupancy of habitat by reef fishes are not currently accounted for in these estimates. Therefore, the objectiv
Authors
Bobbie Suarez, Timothy B. Grabowski

An inventory and typology of permanent floodplain lakes in the Mississippi alluvial valley: A first step to conservation planning

The alluvial valley of the Mississippi River is an extensive area harboring hundreds of lakes created by fluvial dynamics. These floodplain lakes are scattered throughout the valley and carved over thousands of years by shifting river courses and other hydro-fluvial processes associated with contemporary and prehistoric rivers. These lakes have significant ecological importance as they support a l
Authors
Leandro E. Miranda, M.C. Rhodes, Y. Allen, K.J. Killgore
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