Samples of water and gas were collected from six springs and two wells in the Upper Cretaceous Great Valley sequence and Franciscan Formation underlying the Coast Range of northern California and from four oil wells penetrating Tertiary sedimentary rocks in the Kettleman North Dome oil field. Comparison of the dissolved free amino acid compositions of the waters from the two locations show overlapping ranges with many more similarities than differences. The detection of nonprotein amino acids (sarcosine, β-amino n-butyric acid, and others) indicates the protein degradation is partly chemical rather than strictly biological. Other low molecular weight degradation products (methane, ethane, nonvolatile organic acids, and other organic chelating agents) were found. This may be one mechanism for the transportation of organic matter from the source rocks to the reservoir rocks of an oil deposit.