Pan-Amphibia Bd distribution: software release
January 17, 2025
This software release contains the code necessary to reconstruct analyses, tables, and figures presented in "Pan-Amphibia distribution of the fungal parasite Batrachochytrium dendrobatidis varies with species and temperature." These analyses compile temperature and precipitation data with Bd data for a cross-sectional amphibian swabbing survey performed 2014-2017, perform spatial data exploration, format data for input into statistical models, fit and perform model selection, perform posterior predictive checks on within-sample and out of sample data, and estimate ad-hoc detection error evaluation using laboratory and field replicate data.
Citation Information
| Publication Year | 2025 |
|---|---|
| Title | Pan-Amphibia Bd distribution: software release |
| DOI | 10.5066/P1MXUJZM |
| Authors | Daniel A Grear |
| Product Type | Software Release |
| Record Source | USGS Asset Identifier Service (AIS) |
| USGS Organization | National Wildlife Health Center |
| Rights | This work is marked with CC0 1.0 Universal |
Related
Pan-amphibia distribution of the fungal parasite Batrachochytrium dendrobatidis varies with species and temperature
Batrachochytrium dendrobatidis (Bd) is a globally distributed fungal pathogen of amphibians that has contributed to one of the largest disease-related biodiversity losses in wildlife. Bd is regularly viewed through the lens of a global wildlife epizootic because the spread of highly virulent genetic lineages has resulted in well-documented declines and extinctions of multiple amphibian...
Authors
Daniel A. Grear, M. J. Adams, Adam R. Backlin, William J. Barichivich, Adrianne Brand, Gary M. Bucciarelli, Daniel L. Calhoun, Tara E. Chestnut, Jon D Davenport, Andrew E. Dietrich, Graziella Vittoria DiRenzo, Robert N. Fisher, Brad M. Glorioso, Evan H. Campbell Grant, Brian Halstead, Marc P Hayes, Blake Hossack, Morgan Kain, Patrick M. Kleeman, Jeffrey M. Lorch, Brome McCreary, David Miller, Brittany Mosher, Erin L. Muths, Christopher Pearl, Charles W Robinson, Mark F. Roth, Jennifer Christine Rowe, Walter Sadinski, Brent Sigafus, Iga Stasiak, Samuel Sweet, J. Hardin Waddle, Susan C. Walls, Gregory J Watkins-Colwell, Lori A Williams, Megan Winzeler
Related
Pan-amphibia distribution of the fungal parasite Batrachochytrium dendrobatidis varies with species and temperature
Batrachochytrium dendrobatidis (Bd) is a globally distributed fungal pathogen of amphibians that has contributed to one of the largest disease-related biodiversity losses in wildlife. Bd is regularly viewed through the lens of a global wildlife epizootic because the spread of highly virulent genetic lineages has resulted in well-documented declines and extinctions of multiple amphibian...
Authors
Daniel A. Grear, M. J. Adams, Adam R. Backlin, William J. Barichivich, Adrianne Brand, Gary M. Bucciarelli, Daniel L. Calhoun, Tara E. Chestnut, Jon D Davenport, Andrew E. Dietrich, Graziella Vittoria DiRenzo, Robert N. Fisher, Brad M. Glorioso, Evan H. Campbell Grant, Brian Halstead, Marc P Hayes, Blake Hossack, Morgan Kain, Patrick M. Kleeman, Jeffrey M. Lorch, Brome McCreary, David Miller, Brittany Mosher, Erin L. Muths, Christopher Pearl, Charles W Robinson, Mark F. Roth, Jennifer Christine Rowe, Walter Sadinski, Brent Sigafus, Iga Stasiak, Samuel Sweet, J. Hardin Waddle, Susan C. Walls, Gregory J Watkins-Colwell, Lori A Williams, Megan Winzeler