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Publications

Below is a list of WERC's peer-reviewed publications. If you are searching for a specific publication and cannot find it in this list, please contact werc_web@usgs.gov

Filter Total Items: 3617

Limited detection of antibodies to clade 2.3.4.4 A/Goose/Guangdong/1/1996 lineage highly pathogenic H5 avian influenza virus in North American waterfowl

During 2014, highly pathogenic (HP) influenza A viruses (IAVs) of the A/Goose/Guangdong/1/1996 lineage (GsGD-HP-H5), originating from Asia, were detected in domestic poultry and wild birds in Canada and the US. These clade 2.3.4.4 GsGD-HP-H5 viruses included reassortants possessing North American lineage gene segments; were detected in wild birds in the Pacific, Central, and Mississippi flyways; a
Authors
David E. Stallknecht, Clara Kienzle-Dean, Nick Davis-Fields, Christopher S. Jennelle, Andrew S. Bowman, Jacqueline M. Nolting, Walter Boyce, James Crum, Jefferson Santos, Justin D. Brown, Diann Prosser, Susan E. W. De La Cruz, Joshua T. Ackerman, Michael L. Casazza, Scott Krauss, Daniel Perez, Andrew M. Ramey, Rebecca L. Poulson

Development and utility of a gene transcription panel for desert bighorn sheep (Ovis canadensis nelsoni)

Respiratory disease is a key factor impacting the success of the ongoing conservation and recovery of wild sheep populations (WAFWA 2017).  Although the primary pathogens involved in the bighorn sheep pneumonia complex have been identified, the wide variability in herd response following infection is not well understood (Cassirer et al. 2018). The response of populations infected with Mycoplasma o
Authors
Lizabeth Bowen, Kathleen Longshore, Peregrine Wolff, Shannon C. Waters, A. Keith Miles, Mike Cox, Sarah Bullock

Post-release breeding of translocated sharp-tailed grouse and an absence of artificial insemination effects

Context: Translocation has become a widely used method to restore wildlife populations following extirpation. For some species, such as lekking grouse, which breed at traditional mating grounds, reproduction is linked to culturally established geographic locations. Cultural centres are lost upon extirpation, making restoration into otherwise rehabilitated habitats especially challenging. The proce
Authors
Steven R. Mathews, Peter S. Coates, Jennifer A. Fike, Helena Schneider, Dominik Fischer, Sara J. Oyler-McCance, Michael Lierz, David J. Delehanty

Changes in aquatic prey resources in response to estuary restoration in Willapa Bay, southwestern Washington

Executive SummaryThe ongoing restoration of more than 200 hectares of estuarine habitat at Willapa National Wildlife Refuge, southwestern Washington, is expected to benefit a variety of species, including salmonids that use estuarine and tidal marshes as rearing and feeding areas as well as migratory waterbirds. During March–June 2014 and 2015, U.S. Geological Survey Western Ecological Research Ce
Authors
Isa Woo, Melanie J. Davis, Susan E. W. De La Cruz

Regeneration and expansion of Quercus tomentella (island oak) groves on Santa Rosa Island

Quercus tomentella (island oak) is an endemic species that plays a key functional role in Channel Island ecosystems. Growing in groves on highland ridges, Q. tomentella captures fog and increases water inputs, stabilizes soils, and provides habitat for flora and fauna. This cloud forest system has been impacted by a long history of ranching, and restoration efforts are underway that include erosio
Authors
Jay Woolsey, Cause Hanna, Kathryn McEachern, Sean Anderson, Brett D. Hartman

Time-to-detection occupancy modeling: An efficient method for analyzing the occurrence of amphibians and reptiles

Occupancy models provide a reliable method of estimating species distributions while accounting for imperfect detectability. The cost of accounting for false absences is that detection and nondetection surveys typically require repeated visits to a site or multiple-observer techniques. More efficient methods of collecting data to estimate detection probabilities would allow additional sites to be
Authors
Brian J. Halstead, Patrick M. Kleeman, Jonathan P. Rose

Wildlife underpass use and environmental impact assessment: A southern California case study

Environmental planners often rely on transportation structures (i.e., underpasses, bridges) to provide connectivity for animals across developed landscapes. Environmental assessments of predicted environmental impacts from proposed developments often rely on literature reviews or other indirect measures to establish the importance of wildlife crossings. Literature-based evaluations of wildlife cro
Authors
Travis Longcore, Lindsay Almaleh, Brittany Chetty, Kathryn Francis, Robert Freidin, Ching-Sheng Huang, Brooke Pickett, Diane Schreck, Brooke Scruggs, Elise Shulman, Alissa Swauger, Alison Tashnek, Michael Wright, Erin E. Boydston

Canid vs. canid: Insights into coyote–dog encounters from social media

While the relationship between coyotes (Canis latrans) and house cats (Felis catus) may be characterized as one between predators and their prey, coyote interactions with domestic dogs (C. lupus familiaris) appear to be more varied and may include behaviors associated with canid sociality. While encounters between coyotes and dogs are difficult to observe, we capitalized on publicly available vide
Authors
Erin E. Boydston, Eric S. Abelson, Ari Kazanjian, Daniel T. Blumstein

An integrated population model for greater Sage-Grouse (Centrocercus urophasianus) in the bi-state distinct population segment, California and Nevada, 2003–17

The Bi-State Distinct Population Segment (DPS) of greater sage-grouse (Centrocercus urophasianus, hereinafter “sage-grouse”) occupies parts of Alpine, Mono, and Inyo Counties in California, and parts of Douglas, Esmeralda, Lyon, Carson City, and Mineral Counties in Nevada and was proposed for listing as threatened under the Endangered Species Act (ESA) by the U.S. Fish and Wildlife Service (USFWS)
Authors
Steven R. Mathews, Peter S. Coates, Brian G. Prochazka, Mark A. Ricca, Mary B. Meyerpeter, Shawn P. Espinosa, Sherri Lisius, Scott C. Gardner, David J. Delehanty

Rising tides: Assessing habitat vulnerability for an endangered salt marsh-dependent species with sea-level rise

Salt marsh-dependent species are vulnerable to impacts of sea-level rise (SLR). Site-specific differences in ecogeomorphic processes result in different SLR vulnerabilities. SLR impacts to Ridgway’s rail (Rallus obsoletus) of Southern California (SC) and San Francisco Bay (SF), U.S.A. could foreshadow SLR effects on other coastal endemic species. Salt marsh vulnerabilities to SLR were forecasted a
Authors
Jordan A. Rosencranz, Karen M. Thorne, Kevin J. Buffington, Cory T. Overton, John Takekawa, Michael L. Casazza, Jennifer McBroom, Julian K. Wood, Nadav Nur, Richard L. Zembal, Glen M. MacDonald, Richard F. Ambrose

Historical patterns of wildfire ignition sources in California ecosystems

State and federal agencies have reported fire causes since the early 1900s, explicitly for the purpose of helping land managers design fire-prevention programs. We document fire-ignition patterns in five homogenous climate divisions in California over the past 98 years on state Cal Fire protected lands and 107 years on federal United States Forest Service lands. Throughout the state, fire frequenc
Authors
Jon E. Keeley, Alexandra D. Syphard

The Introduced Argentine ant (Linepithema humile) on the California Channel Islands: Distribution and Patterns of Spread

The Argentine ant (Linepithema humile) is a widespread and abundant introduced species that disrupts ecosystems throughout its introduced range. This invader was inadvertently introduced to Santa Catalina, San Clemente, Santa Cruz, and San Nicolas Islands at various points during the past century but currently appears to be absent from the remaining Channel Islands. Multiple spatially disjunct inf
Authors
Christina L. Boser, Korie Merrell, Robert N. Fisher, Ida Naughton, David A Holway