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Publications

Below is a list of WERC's peer-reviewed publications. If you are searching for a specific publication and cannot find it in this list, please contact werc_web@usgs.gov

Filter Total Items: 3617

Prioritizing conserved areas threatened by wildfire and fragmentation for monitoring and management

In many parts of the world, the combined effects of habitat fragmentation and altered disturbance regimes pose a significant threat to biodiversity. This is particularly true in Mediterranean-type ecosystems (MTEs), which tend to be fire-prone, species rich, and heavily impacted by human land use. Given the spatial complexity of overlapping threats and species’ vulnerability along with limited con
Authors
Jeff A. Tracey, Carlton J. Rochester, Stacie A. Hathaway, Kristine L. Preston, Alexandra D. Syphard, Amy G. Vandergast, James E. Diffendorfer, Janet Franklin, Jason B. MacKenzie, Tomas A. Oberbauer, Scott Tremor, Clark S. Winchell, Robert N. Fisher

Spatial sampling bias in the Neotoma paleoecological archives affects species paleo-distribution models

The ability to infer paleo-distributions with limited knowledge of absence makes species distribution modeling (SDM) a useful tool for exploring paleobiogeographic questions. Spatial sampling bias is a known issue when modeling extant species. Here we quantify the spatial sampling bias in a North American packrat midden archive and explore its impact on estimating paleo-distributions. We test whet
Authors
Rich Inman, Janet Franklin, Todd C. Esque, Kenneth E. Nussear

Carotenoid-based skin ornaments reflect foraging propensity in a seabird, Sula leucogaster

Carotenoid-based ornaments are common signalling features in animals. It has long been proposed that such ornaments communicate information about foraging abilities to potential mates. However, evidence linking foraging with ornamentation is largely missing from unmanipulated, free-ranging populations. To investigate this relationship, we studied a coastal population of brown booby (Sula leucogast
Authors
Nathan P. Michael, Roxana Torres, Andreanna J. Welch, Josh Adams, Mario Erandi Bonillas-Monge, Jonathan J. Felis, Laura Lopez-Marquez, Alejandro Martínez-Flores, Anne E. Wiley

Conservation genomics of the Mogollon Narrow-headed gartersnake (Thamnophis rufipunctatus) and Northern Mexican gartersnake (Thamnophis eques megalops)

The ability of populations to persist and adapt to abiotic and biotic changes is reliant on genetic diversity. When connectivity across a species landscape is disrupted, the levels and distribution of genetic diversity can rapidly deteriorate as a result of genetic drift, leading to increased inbreeding and reduced adaptive potential. Therefore, understanding the distribution and degree of genetic
Authors
Dustin A. Wood, Iain D. Emmons, Erika M. Nowak, Bruce L. Christman, Andrew T. Holycross, Amy G. Vandergast

A new approach to automated incubation recess detection using temperature loggers

Nest attendance during incubation is an important facet of avian nesting behavior, and understanding the number, timing, and duration of incubation recesses can improve our understanding of the factors determining avian reproductive success. Temperature loggers are a low-cost, noninvasive method for studying nest attendance, but processing and interpreting the data present logistical challenges fo
Authors
Rebecca Croston, C. Alex Hartman, Mark P. Herzog, Michael L. Casazza, Joshua T. Ackerman

Pre‐fire drought and competition mediate post‐fire conifer mortality in western U.S. National Parks

Tree mortality is an important outcome of many forest fires. Extensive tree injuries from fire may lead directly to mortality, but environmental and biological stressors may also contribute to tree death. However, there is little evidence showing how the combined effects of two common stressors, drought and competition, influence post‐fire mortality. Geographically broad observations of three comm
Authors
Phillip J. van Mantgem, Donald A. Falk, Emma C. Williams, Adrian J. Das, Nathan L. Stephenson

Effects of urbanization, and habitat composition on site occupancy of two snake species using regional monitoring data from southern California

Detection data from a regional, reptile-monitoring program conducted by the U.S. Geological Survey were analyzed to understand the effects of urbanization and habitat composition on site occupancy of the coachwhip (Masticophis flagellum) and striped racer (M. lateralis) in coastal southern California. Likelihood-based occupancy models indicated striped racers responded to habitat composition, favo
Authors
Milan J. Mitrovich, James E. Diffendorfer, Cheryl S. Brehme, Robert N. Fisher

Social attraction used to establish Caspian tern (Hydroprogne caspia) nesting colonies on modified islands at the Don Edwards San Francisco Bay National Wildlife Refuge, California—Final report

To address the 2008/2010 and Supplemental 2014 National Oceanic and Atmospheric Administration Fisheries Biological Opinion for operation of the Federal Columbia River Power System, the U.S. Army Corps of Engineers (USACE) and the Bureau of Reclamation (Reclamation) developed and began implementation of Caspian tern (Hydroprogne caspia) management plans. This implementation includes redistribution
Authors
C. Alex Hartman, Joshua T. Ackerman, Mark P. Herzog, Cheryl Strong, David Trachtenbarg, Crystal A. Shore

Integrating growth and capture–mark–recapture models reveals size‐dependent survival in an elusive species

Survival is a key vital rate for projecting the viability of wild populations. Estimating survival is difficult for many rare or elusive species because recapture rates of marked individuals are low, and the ultimate fate of individuals is unknown. Low recapture rates for many species have made it difficult to accurately estimate survival, and to evaluate the importance of individual and environme
Authors
Jonathan P. Rose, Glenn D. Wylie, Michael L. Casazza, Brian J. Halstead

Cougar dispersal and natal homing in a desert environment

We present a review of cougar dispersal literature and the first evidence of natural (i.e., unmanipulated) homing behavior by a dispersing male cougar (Puma concolor) that sustained severe injuries crossing the northern Mojave Desert. Based on Global Positioning System and ground tracking data, the male traveled a total distance of 981.1 km at 5.03 km/d, including 170.31 km from the Desert Nationa
Authors
David Choate, Kathleen M. Longshore, Daniel B. Thompson

Sea‐level rise, habitat loss, and potential extirpation of a salt marsh specialist bird in urbanized landscapes

Sea‐level rise (SLR) impacts on intertidal habitat depend on coastal topology, accretion, and constraints from surrounding development. Such habitat changes might affect species like Belding's savannah sparrows (Passerculus sandwichensis beldingi; BSSP), which live in high‐elevation salt marsh in the Southern California Bight. To predict how BSSP habitat might change under various SLR scenarios, w
Authors
Jordan Rosencranz, Karen M. Thorne, Kevin J. Buffington, John Y. Takekawa, Ryan F. Hechinger, Tara E. Stewart, Richard F. Ambrose, Glen M. MacDonald, Mark A. Holmgren, Jeff A. Crooks, Robert T. Patton, Kevin D. Lafferty

Selective occupancy of a persistent yet variable coastal river plume by two seabird species

Advances in telemetry and modeling of physical processes expand opportunities to assess relationships between marine predators and their dynamic habitat. The Columbia River plume (CRP) attracts sooty shearwaters Ardenna grisea and common murres Uria aalge, but how seabirds respond to variability in plume waters is unknown. We characterized seabird distributions in relation to hourly, daily, monthl
Authors
Elizabeth M. Phillips, John K. Horne, Josh Adams, Jeannette E. Zamon