Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 41894
Recovering individual-level spatial inference from aggregated binary data
Binary regression models are commonly used in disciplines such as epidemiology and ecology to determine how spatial covariates influence individuals. In many studies, binary data are shared in a spatially aggregated form to protect privacy. For example, rather than reporting the location and result for each individual that was tested for a disease, researchers may report that a disease was detecte
Authors
Nelson Walker, Trevor J. Hefley, Anne Ballmann, Robin E. Russell, Daniel P. Walsh
A U.S.-China EcoPartnership study of disturbed wetland vegetation in West Dongting Lake, China
West Dongting Lake in China is important for human livelihoods and habitat of migratory waterfowl and other wildlife. The waterway re-engineering and agriculture intensification have contributed to changes in hydrology, sediment, and vegetation on the floodplain. This paper describes an EcoPartnership program conducted by the U.S. Geological Survey, Wetland and Aquatic Research Center, and Beijing
Authors
Ting Lei, Beth Middleton
Spring phenology drives range shifts in a migratory Arctic ungulate with key implications for the future
Annual variation in phenology can have profound effects on the behavior of animals. As climate change advances spring phenology in ecosystems around the globe, it is becoming increasingly important to understand how animals respond to variation in the timing of seasonal events and how their responses may shift in the future. We investigated the influence of spring phenology on the behavior of migr
Authors
John P. Severson, Heather E. Johnson, Stephen M. Arthur, William Leacock, Michael J. Suitor
Calcium concentrations in the lower Columbia River, USA, are generally sufficient to support invasive bivalve spread
Dissolved calcium concentration [Ca2+] is thought to be a major factor limiting the establishment and thus the spread of invasive bivalves such as zebra (Dreissena polymorpha) and quagga (Dreissena bugensis) mussels. We measured [Ca2+] in 168 water samples collected along ~100 river-km of the lower Columbia River, USA, between June 2018 and March 2020. We found [Ca2+] to range from 13 to 18 mg L−1
Authors
Stephen M. Bollens, John A. Harrison, Marc G. Kramer, Gretchen Rollwagen-Bollens, Timothy D. Counihan, Salvador B. Robb-Chavez, Sean T. Nolan
Research to inform Caltrans best management practices for reptile and amphibian road crossings
In October of 2014, the U.S. Geological Survey (USGS) began a 5-year project to conduct research to inform Best Management Practices (BMPs) for amphibian and reptile crossing and barrier systems in California. To inform future conservation and transportation planning, this project involved identification of species at highest risk of negative road impacts, creation of geodatabase and spatial mapp
Authors
Cheryl S. Brehme, Robert N. Fisher, Tom E. S. Langton, Anthony P. Clevenger, Esther Adelsheim, Stephanie Barnes, Tristan Edgarian, Brittany Ewing, Stacie A. Hathaway, Michael Hobbs, Jennifer Kingston, A. Launer, Tritia A. Matsuda, Jeremy B. Sebes, C. Vaughn, Elise Watson
Broad-scale surface and atmospheric conditions during large fires in south-central Chile
The unprecedented size of the 2017 wildfires that burned nearly 600,000 hectares of central Chile highlight a need to better understand the climatic conditions under which large fires develop. Here we evaluate synoptic atmospheric conditions at the surface and free troposphere associated with anomalously high (active) versus low (inactive) months of area burned in south-central Chile (ca. 32–41° S
Authors
David B. McWethy, René Garreaud, Andrés Holz, Gregory T. Pederson
Surface water with more natural temperatures promotes physiological and endocrine changes in landlocked Atlantic salmon smolts
Hatchery salmonid smolts are often reared using groundwater with elevated temperatures to maximize growth. Previous work has shown that rearing hatchery smolts in surface water with a more natural thermal regime resulted in increased return rates of adult landlocked Atlantic salmon (Salmo salar). We evaluated whether landlocked Atlantic salmon reared in surface water with a natural temperature reg
Authors
Amy M. Regish, William R. Ardren, Nicholas R Staats, Henry Bouchard, Jonah L. Withers, Theodore R. Castro-Santos, Stephen D. McCormick
Effects of elk and bison herbivory on narrowleaf cottonwood
Ungulate browsing influences the structure and composition of woody plant communities, including species composition and biomass production as well as age distribution, recruitment, and mortality. We evaluated effects of elk and bison herbivory on narrowleaf cottonwood (Populus angustifolia) communities in a semiarid ecosystem in southern Colorado. Cottonwoods in this ecosystem have been aged at ≥
Authors
Linda C. Zeigenfuss, Kathryn A. Schoenecker
Land conversion and pesticide use degrade forage areas for honey bees in America’s beekeeping epicenter
A diverse range of threats have been associated with managed bee declines globally. Recent increases of two known threats, land-use change and pesticide use, have resulted from agricultural expansion and intensification notably in the top honey producing state in the United States (U.S.): North Dakota. This study investigated the dual threat from land conversion and pesticide use surrounding ~14,0
Authors
Dan J. Dixon, Haochi Zheng, Clint R.V. Otto
Demographic responses to density-dependence by two populations of the Florida Tree Snail, Liguus fasciatus (Gastropoda: Orthalicidae), in Everglades National Park
During May-October 1996, we captured and individually marked and released Florida Tree Snails, Liguus fasciatus, from two sites, a subclimax hammock and a large isolated wild tamarind tree, in the Long Pine Key region of Everglades National Park. Populations shared the same two dominant morphs, castaneozonatus and. cingulatus, both of which are strong colonizers. Monthly survivorship between the t
Authors
Walter E. Meshaka, Kenneth G. Rice, Oron L. Bass, Hardin Waddle
Species and population specific gene expression in blood transcriptomes of marine turtles
BackgroundTranscriptomic data has demonstrated utility to advance the study of physiological diversity and organisms’ responses to environmental stressors. However, a lack of genomic resources and challenges associated with collecting high-quality RNA can limit its application for many wild populations. Minimally invasive blood sampling combined with de novo transcriptomic approaches has great pot
Authors
Shreya M. Banjeree, Jamie Adkins Stoll, Camryn D. Allen, Jennifer M. Lynch, Heather S. Harris, Lauren Kenyon, Richard E. Connon, Eleanor J. Sterling, Eugenia Naro-Maciel, Kathryn McFadden, Margaret Lamont, James Benge, Nadia B. Fernandez, Jeffrey A. Seminoff, Scott R. Benson, Rebecca L. Lewison, Tomoharu Eguchi, Tammy M. Summers, Jessy R. Hapdei, Marc R. Rice, Summer Martin, T. Todd Jones, Peter H. Dutton, George H. Balazs, Lisa M. Komoroske
Trophic transfer efficiency in the Lake Superior food web: Assessing the impacts of non-native species
Ecosystem-based management relies on understanding how perturbations influence ecosystem structure and function (e.g., invasive species, exploitation, abiotic changes). However, data on unimpacted systems are scarce; therefore, we often rely on impacted systems to make inferences about ‘natural states.’ Among the Laurentian Great Lakes, Lake Superior provides a unique case study to address non-nat
Authors
Bryan G. Mathias, Thomas R. Hrabik, Joel C. Hoffman, Owen Gorman, Michael J. Seider, Michael E. Sierszen, Mark Vinson, Daniel Yule, Peder M. Yurista