Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 41894
Using next generation sequencing of alpine plants to improve fecal metabarcoding diet analysis for Dall’s sheep
ObjectivesDall’s sheep (Ovis dalli dalli) are important herbivores in the mountainous ecosystems of northwestern North America, and recent declines in some populations have sparked concern. Our aim was to improve capabilities for fecal metabarcoding diet analysis of Dall’s sheep and other herbivores by contributing new sequence data for arctic and alpine plants. This expanded reference library wil
Authors
Kelly E. Williams, Damian M. Menning, Eric J. Wald, Sandra L. Talbot, Kumi L. Rattenbury, Laura R. Prugh
Daily patterns of river herring (Alosa spp.) spawning migrations: Environmental drivers and variation among coastal streams in Massachusetts
The timing of life history events in many plants and animals depends on the seasonal fluctuations of specific environmental conditions. Climate change is altering environmental regimes and disrupting natural cycles and patterns across communities. Anadromous fishes that migrate between marine and freshwater habitats to spawn are particularly sensitive to shifting environmental conditions and thus
Authors
Henry Legett, Adrian Jordaan, Allison H. Roy, John Sheppard, Marcelo Somos-Valenzuela, Michelle Staudinger
Measuring adrenal and reproductive hormones in hair from southern Beaufort Sea polar bears (Ursus maritimus)
Polar bears (Ursus maritimus) use sea ice to access marine mammal prey. In Alaska’s Southern Beaufort Sea, the declining availability of sea ice habitat in summer and fall has reduced opportunities for polar bears to routinely hunt on the ice for seals, their primary prey. This reduced access to prey may result in physiological stress with subsequent potential consequences to reproductive function
Authors
Marilize Van der Walt, Lorin Neuman-Lee, Patricia Terletzky, Todd C. Atwood, Eric Gese, Susannah French
Riparian forests buffer the negative effects of cropland on macroinvertebrate diversity in lowland Amazonian streams
Riparian forests regulate stream ecosystems and biodiversity. Therefore, changes to riparian structure may threaten stream ecosystem function by triggering taxonomic and functional changes to aquatic communities. Because macroinvertebrate assemblages are sensitive to environmental changes, they can be effective indicators of stream integrity in disturbed landscapes. To assess the role of riparian
Authors
Nubia C.S. Marques, Kathi Jo Jankowski, Marcia N. Macedo, Leandro Juen, Ana Luiza-Andrade, Linda A. Deegan
Differential susceptibility of Yukon River and Salish Sea stocks of Chinook salmon Oncorhynchus tshawytscha to ichthyophoniasis
Preliminary evidence suggests that Chinook salmon Oncorhynchus tshawytscha from the Yukon River may be more susceptible to Ichthyophonus sp. infections than Chinook from stocks further south. To investigate this hypothesis in a controlled environment, we experimentally challenged juvenile Chinook from the Yukon River and from the Salish Sea with Ichthyophonus sp. and evaluated mortality, infection
Authors
Diane G. Elliott, Carla M. Conway, Constance L. McKibben, Ashley MacKenzie, Lucas M. Hart, Maya Groner, Maureen K. Purcell, Jacob L. Gregg, Paul Hershberger
Growth and defense characteristics of whitebark pine (Pinus albicaulis) and lodgepole pine (Pinus contorta var latifolia) in a high-elevation, disturbance-prone mixed-conifer forest in northwestern Montana, USA
Recent, widespread tree mortality in the western U.S. resulting from changes in climate, pathogens, insect activity, and forest management practices has led to concerns for many ecologically and culturally important species. Within conifers, resin-based defenses have long been recognized as a primary defense mechanism against a variety of insects and pathogens. Oleoresin produced by trees contain
Authors
Nicholas E. Kichas, Amy M. Trowbridge, Kenneth F. Raffa, Shealyn C. Malone, Sharon M. Hood, Richard G. Everett, David B. McWethy, Gregory T. Pederson
When a typical jumper skips: Itineraries and staging habitats used by Red Knots (Calidris canutus piersmai) migrating between northwest Australia and the New Siberian Islands
The ecological reasons for variation in avian migration, with some populations migrating across thousands of kilometres between breeding and non-breeding areas with one or few refuelling stops, in contrast to others that stop more often, remain to be pinned down. Red Knots Calidris canutus are a textbook example of a shorebird species that makes long migrations with only a few stops. Recognizing t
Authors
Theunis Piersma, Eva Kok, Chris J. Hassell, Yvonne I. Verkuil, Guangchun Lei, He-Bo Peng, Eldar Rakhimberdiev, Paul Howey, Ying-Chi Chan, Lee Tibbitts, Julia Karagicheva
Activity patterns of anadromous fish below a tide gate: Observations from high‐resolution imaging sonar
The construction of dams and tide gates on waterways has altered the physical structure of many coastal, estuarine, and freshwater systems. These changes have come at a cost to fish populations, most notably diadromous species, which rely on connectivity between marine and freshwater systems. These anthropogenic structures can have direct effects on migrating fish, such as blocking fish passage, o
Authors
Christopher B. Rillahan, Derrick Alcott, Theodore R. Castro-Santos, Pingguo He
The demographic and ecological factors shaping diversification among rare Astragalus species
AimEvolutionary radiations are central to the origin and maintenance of biodiversity, yet we rarely understand how they are jointly shaped by demography and ecological opportunity. Astragalus is the largest plant genus in the world and is disproportionately comprised of rare species restricted to narrow geographic and ecological regions. Here, we explored the demographic and ecological mechanisms
Authors
Matthew Richard Jones, Daniel E. Winkler, Robert Massatti
Artificial lights with different spectra do not alter detrimental attraction of young Chinook salmon and sockeye salmon along lake shorelines
Artificial light at night (ALAN) is common in lakes with developed shorelines, especially prevalent in the nearshore areas where juvenile fishes, including salmonids, are present. One concern is that fishes may be attracted to ALAN and become more vulnerable to predators. The use of longer wavelength lights has been suggested to reduce the effects of ALAN; however, the response in juvenile salmoni
Authors
Roger A. Tabor, Elizabeth K Perkin, David Beauchamp, Lyle L. Britt, Rebecca Haehn, John A. Greene, Timothy J. Robinson, Scott Stolnack, Daniel W Lantz, Zachary J Moore
Weighing the unknowns: Value of information for biological and operational uncertainty in invasion management
The management of biological invasions is a worldwide conservation priority. Unfortunately, decision-making on optimal invasion management can be impeded by lack of information about the biological processes that determine invader success (i.e. biological uncertainty) or by uncertainty about the effectiveness of candidate interventions (i.e. operational uncertainty). Concurrent assessment of both
Authors
Shou-Li Li, Joseph Keller, Michael C. Runge, Katriona Shea
Implications of zoonoses from hunting and use of wildlife in North American arctic and boreal biomes: Pandemic potential, monitoring, and mitigation
The COVID-19 pandemic has re-focused attention on mechanisms that lead to zoonotic disease spillover and spread. Commercial wildlife trade, and associated markets, are recognized mechanisms for zoonotic disease emergence, resulting in a growing global conversation around reducing human disease risks from spillover associated with hunting, trade, and consumption of wild animals. These discussions a
Authors
Lucy Keatts, Martin D. Robards, Sarah H. Olson, Karsten Hueffer, Stephen Insley, Damien O. Joly, Susan Kutz, David S. Lee, Cheryl-Lesley B. Chetkiewicz, Stephane Lair, Nicholas D. Preston, Martin Pruvot, Justina C. Ray, Donald Reid, Jonathan M. Sleeman, Raphaela Stimmelmayr, Craig Stephen, Chris Walzer