Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 41758
Dietary niche of three omnivorous turtle species in a northern Florida river: Insights from stable isotope analysis
Macrochelys suwanniensis (Suwannee Alligator Snapping Turtle) coexists with 2 other native large omnivorous turtle species (Chelydra serpentina [Snapping Turtle] and Trachemys scripta scripta [Yellow-bellied Slider]) in a 9-km section of the Santa Fe River in northern Florida. A major shift in dominant submersed aquatic vegetation prompted us to quantify trophic position and niche overlap among th
Authors
Mathew Denton, Gerald R. Johnston, Travis M. Thomas, Hardin Waddle, Susan Walls, Kristen Hart
A decade-long study of repeated prescription burning in California native grassland restoration
Native bunchgrass communities dominated by Stipa pulchra are widely distributed in California but share dominance with non-native annual grasses. Restoration of these grasslands focuses on altering the balance of native to non-native grasses to favor the former. This study investigated the impact of burning on vegetation recovery. In the first postfire year burning showed a 70% reduction in cover
Authors
Jon Keeley, Robert C. Klinger, Teresa J. Brennan, Dawn M. Lawson, John La Grange, Kathryn N. Berg
Towards a better future for biodiversity and people: Modelling Nature Futures
The Nature Futures Framework (NFF) is a heuristic tool for co-creating positive futures for nature and people. It seeks to open up a diversity of futures through mainly three value perspectives on nature – Nature for Nature, Nature for Society, and Nature as Culture. This paper describes how the NFF can be applied in modelling to support decision-making. First, we describe key considerations for t
Authors
H. Kim, G.D. Peterson, W.W. Cheung, S. Ferrier, R. Alkemade, A. Arneth, Jan J. Kuiper, S. Okayasu, L.M. Pereira, L.A. Acosta, R. Chaplin-Kramer, E. den Belder, T.D. Eddy, J. C. Johnson, S. Karlsson-Viinkhuyzen, M.T.J. Kok, P. Leadley, D. Leclère, C. Lundquist, C. Rondini, R.J. Scholes, M.A. Schoolenberg, Y. Shin, E. Stehfest, F. Stephenson, P. Visconti, D. van Vuuren, C.C.C. Wabnitz, J.J. Alava, I. Cuadros-Casanova, K.K. Davies, M.A. Gasalla, G. Halouani, M. Harfoot, S. Hashimoto, T. Hickler, T. Hirsch, G. Kolomytsev, Brian W. Miller, H. Ohashi, M.G. Palomo, A. Popp, R.P. Remme, O. Saito, U.R. Sumalia, S. Willcock, H.M. Pereira
Increased aridity is associated with stronger tradeoffs in ponderosa pine vital functions
Trees must allocate resources to core functions like growth, defense, and reproduction. These allocation patterns have profound effects on forest health, yet little is known about how core functions trade off over time, and even less is known about how a changing climate will impact tradeoffs. We conducted a 21-year survey of growth, defense, and reproduction in 80 ponderosa pine individuals spann
Authors
Angela Gonzalez, Ian Pearse, Miranda Redmond
Dynamic population models with temporal preferential sampling to infer phenology
To study population dynamics, ecologists and wildlife biologists typically use relative abundance data, which may be subject to temporal preferential sampling. Temporal preferential sampling occurs when the times at which observations are made and the latent process of interest are conditionally dependent. To account for preferential sampling, we specify a Bayesian hierarchical abundance model tha
Authors
Michael Schwob, Mevin B. Hooten, Travis Mcdevitt-Galles
Targeted metabolomics characterizes metabolite occurrence and variability in stable freshwater mussel populations
Freshwater mussels (order Unionida) play a key role in freshwater systems as ecosystem engineers and indicators of aquatic ecosystem health. The fauna is globally imperilled due to a diversity of suspected factors; however, causes for many population declines and mortality events remain unconfirmed due partly to limited health assessment tools. Mussel-monitoring activities often rely on population
Authors
Diane L. Waller, Joel Putnam, John Steiner, Brant Fisher, Grant N. Burcham, John W. Oliver, Stephen B. Smith, Richard A. Erickson, Anne Remek, Nancy Bodeker
The relative importance of cisco (Coregonus artedi) in the diets of common loons (Gavia immer) among a set of cisco refuge lakes in Minnesota
Common loon (Gavia immer (Brünnich, 1764)) foraging patterns and the relative importance of cisco (Coregonus artedi Lesueur, 1818) in the diets of loons were evaluated for the Whitefish Chain of Lakes, a set of coldwater cisco refuge lakes in Minnesota, USA. Environmental DNA metabarcoding of loon fecal samples detected 15 fish species. Yellow perch (Perca flavescens (Mitchill, 1814)), mimic shine
Authors
Kevin P. Kenow, Yer Lor, Beth V. Holbrook, Luke J. Fara, Steven C. Houdek, Tariq Tajjioui, Brian R. Gray, Peter C. Jacobson
Masting is uncommon in trees that depend on mutualist dispersers in the context of global climate and fertility gradients
The benefits of masting (volatile, quasi-synchronous seed production at lagged intervals) include satiation of seed predators, but these benefits come with a cost to mutualist pollen and seed dispersers. If the evolution of masting represents a balance between these benefits and costs, we expect mast avoidance in species that are heavily reliant on mutualist dispersers. These effects play out in t
Authors
Tong Qiu, Marie-Claire Aravena Acuna, Davide Ascoli, Yves Bergeron, Michal Mogdziewicz, Thomas Biovin, Raul Bonal, Thomas Caignard, Maxime Cailleret, Rafael Calama, Sergio Donoso Calderon, J. Julio Camarero, Chia-Hua Chang-Yang, Jerome Chave, Francesco Chianucci, Benoit Courbaud, Andrea Cutini, Adrian Das, Nicolas Delpierre, Sylvain Delzon, Michael Dietze, Laurent Dormont, Josep Maria Espelta, Timothy J. Fahey, William Farfar-Rios, Jerry F. Franklin, Catherine A. Gehring, Gregory S. Gilbert, Georg Gratzner, Cathryn H. Greenberg, Arthur Guignabert, Qinfeng Guo, Andrew Hacket-Pain, Arndt Hampe, Qingmin Han, Jan Holik, Kazuhiko Hoshizaki, Ines Ibanez, Jill F. Johnstone, Valentin Journee, Thomas Kitzberger, Jean Knops, Georges Kunstler, Hiroko Kurokawa, Jonathan G. A. Lageard, Jalene LaMontagne, Francois Lefevre, Theodor Leininger, Jean-Marc Limousin, James A. Lutz, Diana Macias, Anders Marell, Eliot J. B. McIntire, Christopher Moore, Emily V. Moran, Renzo Motta, Jonathan A. Myers, Thomas A. Nagel, Shoji Naoe, Mohoko Noguchi, Michio Oguro, Robert Parmenter, Ignacio M. Perez-Ramos, Lukasz Piechnik, Tomasz Podforski, John Poulsen, Miranda Redmond, Chad Reid, Kyle C. Rodman, Fransisco Rodrigues-Sanchez, Pavel Samonil, Javier Sanguinetto, Lane Scher, Barbara Seget, Shubhi Sharma, Mitsue Shibata, Miles Silman, Michael A. Steele, Nathan L. Stephenson, Jacob N. Straub, Samantha Sutton, Jennifer J. Swenson, Margaret Swift, Peter A. Thomas, Maria Uriarte, Giorgio Vacchiano, Amy V. Whipple, Thomas G. Whitham, Andreas Wion, Joseph Wright, Kai Zhu, Jess Zimmermann, Magdalena Zywiec, James S. Clark
Captive breeding, husbandry, release, and translocation of sciurids
Captive breeding and release programs have been instrumental in preventing the extinction of some wildlife species, but these programs have been less successful for other species. Evaluating initial guidelines for procedures to start a captive breeding and release program for a particular species is an important first step in the process of initiating such a program. The Mohave ground squirrel (Xe
Authors
Sharon A Poessel
Multi-scale relationships in thermal limits within and between two cold-water frog species uncover different trends in physiological vulnerability
1. Critical thermal limits represent an important component of an organism's capacity to cope with future temperature changes. Understanding the drivers of variation in these traits may uncover patterns in physiological vulnerability to climate change. Local temperature extremes have emerged as a major driver of thermal limits, although their effects can be mediated by the exploitation of fine-sca
Authors
Amanda S. Cicchino, Alisha A. Shah, Brenna R. Forester, Jason B. Dunham, Cameron K. Ghalambor, W. Chris Funk
MetaIPM: Placing integral projection models into a metapopulation framework
Metapopulation models include spatial population dynamics such as dispersion and migration between subpopulations. Integral projection models (IPMs) can include demographic rates as a function of size. Traditionally, metapopulation models do not included detailed populaiton models such as IPMs. In some situations, both local population dynamics (e.g. size-based survival) and spatial dynamics are i
Authors
Richard A. Erickson, James P Peirce, Greg J. Sandland, Hannah Mann Thompson, Alison A. Coulter, David C. Glover
Reevaluation of 2,3,7,8-tetrachlorodibenzo-p-dioxin equivalency factors for dioxin-like polychlorinated dibenzo-p-dioxins, polychlorinated dibenzofurans, and polychlorinated biphenyls for fishes
An expert meeting was organized by the World Health Organization (WHO) in 1997 to streamline assessments of risk posed by mixtures of dioxin-like chemicals (DLCs) through development of 2,3,7,8-tetrachlorodibenzo-p-dioxin (2,3,7,8-TCDD) equivalency factors (TEFs) for mammals, birds, and fishes. No reevaluation has been performed for fish TEFs. Therefore, the objective of the present study was to r
Authors
Jon A. Doering, Donald E. Tillitt, Steve Wiseman