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[Disease/condition] case definition [template] for wildlife

Diagnostic laboratories receive carcasses and samples for diagnostic evaluation and pathogen/toxin detection. Case definitions bring clarity and consistency to the evaluation process. Their use within and between organizations allows more uniform reporting of diseases and etiologic agents. The intent of a case definition is to provide scientifically based criteria for determining (a) if an individ
Authors
Kimberli J.G. Miller, E. Jane Parmley, Anne Ballmann, Jennifer Buckner, Megan Jones, Julia S. Lankton, Marnie Zimmer, Emily Lankau

Case definitions for wildlife diseases

Welcome to the first manual of “Case Definitions for Wildlife Diseases,” a “living” electronic publication. The plan is to add and update this manual’s case definitions periodically as warranted; thus, this manual will never be completed, and readers should download the latest versions of specific chapters (that is, definitions) when available. Constructive suggestions from readers are welcome and
Authors
Kimberli J.G. Miller, E. Jane Parmley, Anne Ballmann, Jennifer Buckner, Megan Jones, Julia S. Lankton, Marnie Zimmer

Flood of October 31 to November 3, 2019, East Canada Creek, West Canada Creek, and Sacandaga River Basins

Between October 31 and November 3, 2019, historic flooding in parts of the Mohawk Valley and southern Adirondack region resulted in one fatality, an estimated $33 million in damages, and the declaration of a state of emergency for 13 New York counties. Flooding resulted from high-intensity rainfall within a 24-hour period between October 31 and November 1, 2019, at the end of an October that had m
Authors
Alexander P. Graziano, Travis L. Smith, Arthur G. Lilienthal

Yosemite toad (Anaxyrus canorus) transcriptome reveals interplay between speciation genes and adaptive introgression

Genomes are heterogeneous during the early stages of speciation, with small ‘islands’ of DNA appearing to reflect strong adaptive differences, surrounded by vast seas of relative homogeneity. As species diverge, secondary contact zones between them can act as an interface and selectively filter through advantageous alleles of hybrid origin. Such introgression is another important adaptive process,
Authors
Paul A. Maier, A. G. Vandergast, Andrew J. Bohonak

Temporal variability and sources of PFAS in the Rio Grande, New Mexico through an arid urban area using multiple tracers and high-frequency sampling

Per- and polyfluoroalkyl substances (PFAS) are ubiquitous in the environment but sources are not well defined for temporal and spatial aspects within an urban environment, and especially for an arid urban environment subject to seasonal short term high-intensity precipitation events. A focused diel sampling was conducted in the summer of 2021 to assess the temporal and spatial variability of PFAS
Authors
Kimberly R. Beisner, Rebecca E. Travis, David Alvarez, Larry B. Barber, Jacob Fleck, Jeramy Roland Jasmann

Implications for the resilience of modern coastal systems derived from mesoscale barrier dynamics at Fire Island, New York

Understanding the response of coastal barriers to future changes in rates of sea level rise, sediment availability, and storm intensity/frequency is essential for coastal planning, including socioeconomic and ecological management. Identifying drivers of past changes in barrier morphology, as well as barrier sensitivity to these forces, is necessary to accomplish this. Using remote sensing, field,
Authors
Daniel J. Ciarletta, Jennifer L. Miselis, Julie Bernier, Arnell S. Forde

Time of year and weather influence departure decisions of sandhill cranes at a primary stopover

The Rocky Mountain Population (RMP) of greater sandhill cranes uses a key stopover area, the San Luis Valley (SLV) in Colorado. Parameters of migration phenology can differ between autumn and spring and are affected by weather and environmental factors. We hypothesized that sandhill cranes in the SLV would have a longer stopover duration in autumn than in spring, and that wind assistance, crosswin
Authors
Rachel A. Vanausdall, William L. Kendall, Rachel A. Vanausdall, Quentin R. Hays

Annotated bibliography of scientific research relevant to oil and gas reclamation best management practices in the western United States, published from 1969 through 2020

Integrating recent scientific knowledge into management decisions supports effective natural resource management and can lead to better resource outcomes. However, finding and accessing scientific knowledge can be time consuming and costly. To assist in this process, the U.S. Geological Survey has created a series of annotated bibliographies on topics of management concern for lands in the western
Authors
Rebecca K. Mann, Molly L. McCormick, Seth M. Munson, Hillary F. Cooper, Lee C. Bryant, Jared K. Swenson, Laura A. Johnston, Savannah L. Wilson, Michael C. Duniway

Climatic variability as a principal driver of primary production in the southernmost subalpine Rocky Mountain lake

Mountain lakes are sensitive indicators of anthropogenically driven global change, with lake sediment records documenting increased primary production during the twentieth century. Atmospheric nutrient deposition and warming have been attributed to changes in other Western mountain lakes, however, the intensity of these drivers varies. We analyzed a sediment core representing a 270-year record fro
Authors
Anna Shampain, Jill Baron, Peter R. Leavitt, Sarah Spaulding

California Groundwater Ambient Monitoring and Assessment (GAMA) Program Priority Basin Project: Domestic-Supply Assessment

The GAMA-PBP is a comprehensive assessment of statewide groundwater quality in California. The first phase of the GAMA-PBP in 2004–15 assessed groundwater resources used for public drinking-water supplies. The second phase is assessing groundwater resources used for domestic drinking-water supplies. An estimated 2 million Californians rely on individual domestic wells or State small-system wells f
Authors
Jennifer L. Shelton, Elias Tejeda

Modeled flooding by tsunamis and a storm versus observed extent of coral erratics on Anegada, British Virgin Islands— Further evidence for a great Caribbean earthquake six centuries ago

Models of near-field tsunamis and an extreme hurricane provide further evidence for a great precolonial earthquake along the Puerto Rico Trench. The models are benchmarked to brain-coral boulders and cobbles on Anegada, 125 km south of the trench. The models are screened by their success in flooding the mapped sites of these erratics, which were emplaced some six centuries ago. Among 25 tsunami sc
Authors
Yong Wei, Uri S. ten Brink, Brian F. Atwater

Incorporating life history diversity in an integrated population model to inform viability analysis

Life history diversity can significantly affect population dynamics and effects of management actions. For instance, variation in individual responses to environmental variability can reduce extirpation risk to populations, as the portfolio effect dampens temporal variability in abundance. Moreover, differences in habitat use may cause individuals to respond differently to habitat management and c
Authors
Mark H. Sorel, Jeffrey C. Jorgensen, Richard W. Zabel, Mark David Scheuerell, Andrew R. Murdoch, Cory M. Kamphaus, Sarah J. Converse