Software

The abundance of wildlife occurrence datasets that are currently accessible can be valuable for efforts such as species distribution modeling and range delineation. However, the task of downloading and filtering occurrence records is often complex due to errors and uncertainties that are present in datasets. This repository provides a high-level framework for acquiring and filtering occurrence dat

Decisions related to controversial problems in natural resource management receive the greatest support when they account for multiple objectives of stakeholders in a structured and transparent fashion. In the United States, management of feral horses (Equus caballus) is a controversial multi-objective problem because disparate stakeholder groups have varying objectives and opinions about how to m

Abstraction Layer for Ephemerides version 0.9.0

Abstraction Layer for Ephemeride version 0.8.7

The Science-based Management of Ravens Tool (SMaRT) supports a science-based adaptive management framework that incorporates recent quantitative analyses and mapping products for addressing areas with elevated common raven (Corvus corax) numbers and minimizing potential adverse impacts to sensitive species, agricultural damage, and human safety (Dettenmaier et al. 2021). This is a web-based applic

Code files "growth_analysis.R" -An R script to fit the von Bertalanffy growth model to growth data from San Francisco gartersnakes. The von Bertalanffy growth model is fit using JAGS software (Plummer 2003), and is based on the model presented in Armstrong and Brooks (2013). "survival_analysis.R" -An R script to fit the robust-design Cormack-Jolly-Seber model to capture-mark-recapture data from

poscrptR is a simple R package with the sole purpose of distributing a shiny app for predicting post-fire conifer regeneration. Learn more about shiny apps here.

The Groundwater/Surface-Water Method Selection Tool (GW/SW-MST) is a spreadsheet-based tool to help practitioners identify methods for use in groundwater/surface-water (GW/SW) exchange and hyporheic studies. GW/SW exchange and hyporheic processes are topics receiving increasing attention from the hydrologic community. Hydraulic, chemical, temperature, geophysical, and remote sensing methods are u

This software code was developed to estimate the probability that individuals found at a geographic location will belong to the same genetic cluster as individuals at the nearest empirical sampling location for which ancestry is known. POPMAPS includes 5 main functions to calculate and visualize these results (see Table 1 for functions and arguments). Population assignment coefficients and a raste

SolVES is a tool for modeling and mapping social survey response data in relation to explanatory environmental variables. SolVES 4.0 was developed as open-source software with Python and uses the free software packages QGIS for its user interface and PostgreSQL spatially enabled by PostGIS for its source database. Updates to the previous version include minor changes to the source database and use

This software archive is superseded by Hydrologic Toolbox v1.1.0, available at the following citation: Barlow, P.M., McHugh, A.R., Kiang, J.E., Zhai, T., Hummel, P., Duda, P., and Hinz, S., 2024, U.S. Geological Survey Hydrologic Toolbox version 1.1.0 software archive: U.S. Geological Survey software release, https://doi.org/10.5066/P13VDNAK. The U.S. Geological Survey Hydrologic Toolbox is a Wind