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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. **Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 3984

Using variance components to estimate power in a hierarchically nested sampling design improving monitoring of larval Devils Hole pupfish

We used variance components to assess allocation of sampling effort in a hierarchically nested sampling design for ongoing monitoring of early life history stages of the federally endangered Devils Hole pupfish (DHP) (Cyprinodon diabolis). Sampling design for larval DHP included surveys (5 days each spring 2007–2009), events, and plots. Each survey was comprised of three counting events, where DHP
Authors
Maria C. Dzul, Philip M. Dixon, Michael C. Quist, Stephen J. Dinsomore, Michael R. Bower, Kevin P. Wilson, D. Bailey Gaines

Gauging state-level and user group views of oyster reef restoration activities in the northern Gulf of Mexico

Successful oyster reef restoration, like many conservation challenges, requires not only biological understanding of the resource, but also stakeholder cooperation and political support. To measure perceptions of oyster reef restoration activities and priorities for future restoration along the northern Gulf of Mexico coast, a survey of 1500 individuals representing 4 user groups (oyster harvester
Authors
Megan K. LaPeyre, Ashby Nix, Luke Laborde, Bryan P. Piazza

Semi-discrete biomass dynamic modeling: an improved approach for assessing fish stock responses to pulsed harvest events

Continuous harvest over an annual period is a common assumption of continuous biomass dynamics models (CBDMs); however, fish are frequently harvested in a discrete manner. We developed semidiscrete biomass dynamics models (SDBDMs) that allow discrete harvest events and evaluated differences between CBDMs and SDBDMs using an equilibrium yield analysis with varying levels of fishing mortality (F). E
Authors
Clay Pierce, Michael E. Colvin, Timothy W. Stewart

Relying on fin erosion to identify hatchery-reared brown trout in a Tennessee river

Hatchery-induced fin erosion can be used to identify recently stocked catchable-size brown trout Salmo trutta during annual surveys to qualitatively estimate contributions to a fishery. However, little is known about the longevity of this mark and its effectiveness as a short-term (≤ 1 year) mass-marking technique. We evaluated hatchery-induced pectoral fin erosion as a mass-marking technique for
Authors
Jonathan R. Meerbeek, Phillip William Bettoli

Effects of flow dynamics on the aquatic-terrestrial transition zone (ATTZ) of lower Missouri river sandbars with implications for selected biota

Sandbars are an important aquatic terrestrial transition zone (ATTZ) in the active channel of rivers that provide a variety of habitat conditions for riverine biota. Channelization and flow regulation in many large rivers have diminished sandbar habitats and their rehabilitation is a priority. We developed sandbar-specific models of discharge-area relationships to determine how changes in flow reg
Authors
Emily Tracy-Smith, David L. Galat, Robert B. Jacobson

Non-lethal sampling of walleye for stable isotope analysis: a comparison of three tissues

Stable isotope analysis of fishes is often performed using muscle or organ tissues that require sacrificing animals. Non-lethal sampling provides an alternative for evaluating isotopic composition for species of concern or individuals of exceptional value. Stable isotope values of white muscle (lethal) were compared with those from fins and scales (non-lethal) in walleye, Sander vitreus (Mitchill)
Authors
Steven R. Chipps, J.A. VanDeHey, M.J. Fincel

Gill Na+,K+-ATPase of Atlantic salmon smolts in freshwater is not a predictor of long-term growth in seawater

Gill Na+,K+-ATPase activity is a widely used measure of osmoregulatory preparedness in salmonid smolts. The degree to which this measure may predict long term performance is uncertain. In order to assess the relationship of this enzyme to long term growth and ion homeostasis, a cohort of Atlantic salmon hatchery smolts was used in a controlled environment with no salinity perturbations. In May 200
Authors
Gayle B. Zydlewski, Joseph D. Zydlewski

Comparison of three methods for long-term monitoring of boreal lake area using Landsat TM and ETM+ imagery

Programs to monitor lake area change are becoming increasingly important in high latitude regions, and their development often requires evaluating tradeoffs among different approaches in terms of accuracy of measurement, consistency across multiple users over long time periods, and efficiency. We compared three supervised methods for lake classification from Landsat imagery (density slicing, class
Authors
Jennifer K. Roach, Brad Griffith, David Verbyla

Timing and synchrony of births in bighorn sheep: implications for reintroduction and conservation

Context: Timing (mean birthdate) and synchrony (variance around that date) of births can influence survival of young and growth in ungulate populations. Some restored populations of ungulates may not adjust these life-history characteristics to environments of release sites until several years after release, which may influence success of reintroductions. Aims: We quantified timing and synchrony o
Authors
Jericho C. Whiting, Daniel Olson, Justin M. Shannon, R. Terry Bowyer, Robert W. Klaver, Jerran T. Flinders

Estimating tag loss of the Atlantic Horseshoe crab, Limulus polyphemus, using a multi-state model

The Atlantic Horseshoe crab, Limulus polyphemus, is a valuable resource along the Mid-Atlantic coast which has, in recent years, experienced new management paradigms due to increased concern about this species role in the environment. While current management actions are underway, many acknowledge the need for improved and updated parameter estimates to reduce the uncertainty within the management
Authors
Catherine Alyssa Butler, Conor P. McGowan, J. Barry Grand, David Smith

Introduction to the 8th International Workshop on Smoltification and a synthesis of major findings

The early life history of anadromous salmonid fishes, be they Atlantic (Salmo salar) or Pacific salmon (Oncorhynchus spp.), trout of those genera, or charrs (Salvelinus spp.), appears much more complex than previously thought. The seaward movement or migration is extremely polymorphic among and within species. To help provide understanding of the processes involved, and implications for conservati
Authors
Carl B. Schreck, Steven D. McCormick, Björn Thrandur Björnsson, Sigurd O. Stefansson, Hiroshi Ueda

Influence of salinity and prey presence on the survival of aquatic macroinvertebrates of a freshwater marsh

Salinization of coastal freshwater environments is a global issue. Increased salinity from sea level rise, storm surges, or other mechanisms is common in coastal freshwater marshes of Louisiana, USA. The effects of salinity increases on aquatic macroinvertebrates in these systems have received little attention, despite the importance of aquatic macroinvertebrates for nutrient cycling, biodiversity
Authors
Sung-Ryong Kang, Sammy L. King