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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. **Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 4351

The desperate dozen: Fishes on the brink

IT IS NO SECRET THAT OUR NATIVE AQUATIC ANIMALS ARE IN DECLINE. There are currently 582 species of animals on the Federal list of endangered and threatened species, 268 of these (46%) are found in freshwater habitats. Of the amazing assemblage of 675 fishes found in southeastern waters, more than a quarter are considered imperiled. While all of the Earth’s ecosystems are in trouble, freshwater hab
Authors
Stuart A. Welsh

Microhabitat use by brook trout inhabiting small tributaries and a large river main stem: Implications for stream habitat restoration in the central Appalachians

Brook trout (Salvelinus fontinalis) habitat restoration is needed across a range of stream sizes; however, studies quantifying brook trout habitat preferences in streams of differing sizes are rare. We used radio-telemetry to quantify adult brook trout microhabitat use in a central Appalachian watershed, the upper Shavers Fork of the Cheat River in eastern West Virginia. Our objectives were to: 1)
Authors
Jeff L. Hansbarger, J. Todd Petty, Patricia M. Mazik

Pit tag retention in small (205-370 mm) American eels, Anguilla rostrata

No abstract available.
Authors
Jennifer L. Zimmerman, Stuart A. Welsh

Instream flow assessment of streams draining the Arbuckle-Simpson Aquifer

The availability of high quality water is critical to both humans and ecosystems. A recent proposal was made by rapidly expanding municipalities in central Oklahoma to begin transferring groundwater from the Arbuckle-Simpson aquifer, a sensitive sole-source aquifer in south-central Oklahoma. Concerned citizens and municipalities living on and getting their drinking water from the Arbuckle-Simpson
Authors
Titus S. Seilheimer, William L. Fisher

Rivers and streams: Ecosystem dynamics and integrating paradigms

Full understanding of running waters requires an ecosystem perspective, which encompasses the physical and chemical setting in interaction with dependent biological communities. Several conceptual models or paradigms of river and stream ecosystems that capture critical components of lotic ecosystems have been developed, including the ‘river continuum concept’, to describe fluxes of matter and ener
Authors
K.W. Cummins, M.A. Wilzbach

Pathogens associated with native and exotic trout populations in Shenandoah National Park and the relationships to fish stocking practices

Restrictive fish stocking policies in National Parks were developed as early as 1936 in order to preserve native fish assemblages and historic genetic diversity. Despite recent efforts to understand the effects of non-native or exotic fish introductions, park managers have limited information regarding the effects of these introductions on native fish communities. Shenandoah National Park was esta
Authors
Frank M. Panek, James Atkinson, John Coll

A bird community on the edge: habitat use of forest songbirds In eastern Oklahoma

Several species of forest songbirds reach a western limit of their respective distributions in eastern Oklahoma. The relative infl uence of various habitat variables on patterns of occurrence in this region may differ from those same infl uences in the core of species’ ranges. We examined the infl uence of 16 habitat variables on the occurrence and density of a suite of forest songbirds. We sample
Authors
Vincent S. Cavalieri, Timothy J. O'Connell, David M. Leslie

Projecting cumulative benefits of multiple river restoration projects: an example from the Sacramento-San Joaquin River system in California

Despite increasingly large investments, the potential ecological effects of river restoration programs are still small compared to the degree of human alterations to physical and ecological function. Thus, it is rarely possible to “restore” pre-disturbance conditions; rather restoration programs (even large, well-funded ones) will nearly always involve multiple small projects, each of which can ma
Authors
G. Mathias Kondolf, Paul L. Angermeier, Kenneth Cummins, Thomas Dunne, Michael Healey, Wim Kimmerer, Peter B. Moyle, Dennis Murphy, Duncan Patten, Steve F. Railsback, Denise J. Reed, Robert B. Spies, Robert Twiss

Integrating human impacts and ecological integrity into a risk-based protocol for conservation planning

Conservation planning aims to protect biodiversity by sustainng the natural physical, chemical, and biological processes within representative ecosystems. Often data to measure these components are inadequate or unavailable. The impact of human activities on ecosystem processes complicates integrity assessments and might alter ecosystem organization at multiple spatial scales. Freshwater conservat
Authors
K.M. Mattson, Paul L. Angermeier

Mycobacterium avium subsp. paratuberculosis in scavenging mammals in Wisconsin

The presence of Mycobacterium avium subsp. paratuberculosis (MAP) in non-ruminant wildlife has raised questions regarding the role of these species in Johne's disease transmission. In this study we tested 472 tissues from 212 animals of six different species of scavenging mammals. All animals were taken from within a 210-square-mile area in Dane and Iowa counties of south central Wisconsin from Se
Authors
Jennifer L. Anderson, Jennifer K. Meece, Jeff J. Koziczkowski, Dorn L. Clark, Roy P. Radcliff, Cherrie A. Nolden, Michael D. Samuel, Jay L. E. Ellingson

Assessing the concentration, speciation, and toxicity of dissolved metals during mixing of acid-mine drainage and ambient river water downstream of the Elizabeth Copper Mine, Vermont, USA

The authors determine the composition of a river that is impacted by acid-mine drainage, evaluate dominant physical and geochemical processes controlling the composition, and assess dissolved metal speciation and toxicity using a combination of laboratory, field and modeling studies. Values of pH increase from 3.3 to 7.6 and the sum of dissolved base metal (Cd + Co + Cu + Ni + Pb + Zn) concentrati
Authors
Laurie S. Balistrieri, R.R. Seal, N.M. Piatak, B. Paul

Fish assemblages of the upper Little Sioux River basin, Iowa, USA: Relationships with stream size and comparison with historical assemblages

We characterized the fish assemblages in second to fifth order streams of the upper Little Sioux River basin in northwest Iowa, USA and compared our results with historical surveys. The fish assemblage consisted of over twenty species, was dominated numerically by creek chub, sand shiner, central stoneroller and other cyprinids, and was dominated in biomass by common carp. Most of the species and
Authors
D. Palic, L. Helland, B.R. Pedersen, J.R. Pribil, R.M. Grajeda, Anna Loan-Wilsey, C.L. Pierce
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