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Publications

Dive into our publications and explore the science from the Environmental Health Program (Toxic Substances Hydrology and Contaminant Biology).

Filter Total Items: 4047

Characterization of environmental cues for initiation of reproductive cycling and spawning in shovelnose sturgeon Scaphirhynchus platorynchus in the Lower Missouri River, USA

We presume that the shovelnose sturgeon (Scaphirhynchus platorynchus) has evolved to spawn in the springtime when environmental conditions are at some optimum, but this state has not yet been defined. In this study physiological readiness to spawn in shovelnose sturgeon was examined to define more closely when spawning could occur and thus identify and evaluate prevailing environmental conditions
Authors
D. M. Papoulias, A. J. DeLonay, M.L. Annis, M. L. Wildhaber, D. E. Tillitt

On-site evaluation of the suitability of a wetted instream habitat in the Middle Rio Grande, New Mexico, for the Rio Grande silvery minnow (Hybognathus amarus)

Two in-situ exposure studies were conducted with the federally-listed endangered Rio Grande silvery minnow (Hybognathus amarus). One-year-old adults were exposed in cages deployed at three sites in the Middle Rio Grande, N. Mex., for 4 days to assess survival and for 26 days to evaluate survival, growth, overall health, and whole-body elemental composition. The test sites were located on the Puebl

Baseline ecological risk assessment of the Calcasieu Estuary, Louisiana: 3. An evaluation of the risks to benthic invertebrates associated with exposure to contaminated sediments

The sediments in the Calcasieu Estuary are contaminated with a wide variety of chemicals of potential concern (COPCs), including heavy metals, polycyclic aromatic hydrocarbons, polychlorinated biphenyls, phthalates, chlorinated benzenes, and polychlorinated dibenzo-p-dioxins and dibenzofurans. The sources of these COPCs include both point and non-point source discharges. As part of a baseline ecol
Authors
Donald D. MacDonald, Christopher G. Ingersoll, Nile E. Kemble, Dawn E. Smorong, Jesse A. Sinclair, Rebekka Lindskoog, Gary Gaston, Denise Sanger, R. Scott Carr, James Biedenbach, Ron Gouguet, John Kern, Ann Shortelle, L. Jay Field, John Meyer

Baseline ecological risk assessment of the Calcasieu Estuary, Louisiana: 1. Overview and problem formulation

A remedial investigation/feasibility study (RI/FS) of the Calcasieu Estuary cooperative site was initiated in 1998. This site, which is located in the southwestern portion of Louisiana in the vicinity of Lake Charles, includes the portion of the estuary from the saltwater barrier on the Calcasieu River to Moss Lake. As part of the RI/FS, a baseline ecological risk assessment (BERA) was conducted t
Authors
Donald D. MacDonald, Dwayne R.J. Moore, Christopher G. Ingersoll, Dawn E. Smorong, R. Scott Carr, Ron Gouguet, David Charters, Duane Wilson, Tom Harris, Jon Rauscher, Susan Roddy, John Meyer

A noninvasive, direct real-time PCR method for sex determination in multiple avian species

Polymerase chain reaction (PCR)-based methods to determine the sex of birds are well established and have seen few modifications since they were first introduced in the 1990s. Although these methods allowed for sex determination in species that were previously difficult to analyse, they were not conducive to high-throughput analysis because of the laboriousness of DNA extraction and gel electropho
Authors
Jessica L. Brubaker, Natalie K. Karouna-Renier, Yu Chen, Kathryn Jenko, Daniel T. Sprague, Paula F.P. Henry

A geospatial approach to identify water quality issues for National Wildlife Refuges in Oregon and Washington

Many National Wildlife Refuges (Refuges) have impaired water quality resulting from historic and current land uses, upstream sources, and aerial pollutant deposition. Competing duties limit the time available for Refuge staff to identify and evaluate potential water quality issues. As a result, water quality–related issues may not be resolved until a problem has already arisen. This study develope
Authors
Jo Ellen Hinck, Kimberly Chojnacki, Susan E. Finger, Greg Linder, Kevin Kilbride

Suspended sediment and organic contaminants in the San Lorenzo River, California, water years 2009-2010

This report presents analyses of suspended sediment and organic contaminants measured during a two-year study of the San Lorenzo River, central California, which discharges into the Pacific Ocean within the Monterey Bay National Marine Sanctuary. Most suspended-sediment transport occurred during flooding caused by winter storms; 55 percent of the sediment load was transported by the river during a
Authors
Amy E. Draut, Christopher H. Conaway, Kathy R. Echols, Curt D. Storlazzi, Andrew Ritchie

Estimating occupancy dynamics in an anuran assemblage from Louisiana, USA

Effective monitoring programs are designed to track changes in the distribution, occurrence, and abundance of species. We developed an extension of Royle and Kéry's (2007) single species model to estimate simultaneously temporal changes in probabilities of detection, occupancy, colonization, extinction, and species turnover using data on calling anuran amphibians, collected from 2002 to 2006 in th
Authors
Susan C. Walls, J. Hardin Waddle, Robert M. Dorazio

Threats of habitat and water-quality degradation to mussel diversity in the Meramec River Basin, Missouri, USA

The Meramec River Basin in east-central Missouri is an important stronghold for native freshwater mussels (Order: Unionoida) in the United States. Whereas the basin supports more than 40 mussel species, previous studies indicate that the abundance and distribution of most species are declining. Therefore, resource managers have identified the need to prioritize threats to native mussel populations
Authors
Jo Ellen Hinck, Christopher G. Ingersoll, Ning Wang, Tom Augspurger, M. Christopher Barnhart, Stephen E. McMurray, Andrew D. Roberts, Lynn Schrader

Borehole geophysical investigation of a formerly used defense site, Machiasport, Maine, 2003-2006

The U.S. Geological Survey, in cooperation with the U.S. Army Corps of Engineers, collected borehole geophysical logs in 18 boreholes and interpreted the data along with logs from 19 additional boreholes as part of an ongoing, collaborative investigation at three environmental restoration sites in Machiasport, Maine. These sites, located on hilltops overlooking the seacoast, formerly were used for
Authors
Carole D. Johnson, Remo A. Mondazzi, Peter K. Joesten

Sediment toxicity test results for the Urban Waters Study 2010, Bellingham Bay, Washington

The Washington Department of Ecology annually determines the quality of recently deposited sediments in Puget Sound as a part of Ecology's Urban Waters Initiative. The annual sediment quality studies use the Sediment Quality Triad (SQT) approach, thus relying on measures of chemical contamination, toxicity, and benthic in-faunal effects (Chapman, 1990). Since 2002, the studies followed a rotating
Authors
James M. Biedenbach

Biodegradation and attenuation of steroidal hormones and alkylphenols by stream biofilms and sediments

Biodegradation of select endocrine-disrupting compounds (17β-estradiol, estrone, 17α-ethynylestradiol, 4-nonylphenol, 4-nonylphenolmonoexthoylate, and 4-nonylphenoldiethoxylate) was evaluated in stream biofilm, sediment, and water matrices collected from locations upstream and downstream from a wastewater treatment plant effluent discharge. Both biologically mediated transformation to intermediate
Authors
Jeffrey Writer, Larry B. Barber, Joseph N. Ryan, Paul M. Bradley