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Publications

Find out more about Species Management Research Program through our publications. Browse the entire list below or by specific topics at the links below.

Filter Total Items: 653

Integrated diet analyses reveal contrasting trophic niches for wild and hatchery juvenile Chinook Salmon in a large river delta

Hatchery programs have been used as a conservation tool to bolster declining populations of Chinook Salmon Oncorhynchus tshawytscha along much of the North American Pacific coast. In many watersheds, hatchery stocks are released concurrently with the wild population, thus raising the potential for density‐dependent effects. Competition for prey resources during the critical period for early marine
Authors
Melanie J. Davis, Isa Woo, Christopher S. Ellings, Sayre Hodgson, David A. Beauchamp, Glynnis Nakai, Susan E.W. De La Cruz

Differential changes in the onset of spring across US National Wildlife Refuges and North American migratory bird flyways

Warming temperatures associated with climate change can have indirect effects on migratory birds that rely on seasonally available food resources and habitats that vary across spatial and temporal scales. We used two heat-based indices of spring onset, the First Leaf Index (FLI) and the First Bloom Index (FBI), as proxies of habitat change for the period 1901 to 2012 at three spatial scales: the U
Authors
Eric K. Waller, Theresa M. Crimmins, Jessica J. Walker, Erin E. Posthumus, Jake Weltzin

Collision and displacement vulnerability to offshore wind energy infrastructure among marine birds of the Pacific Outer Continental Shelf

Marine birds are vulnerable to collision with and displacement by offshore wind energy infrastructure (OWEI). Here we present the first assessment of marine bird vulnerability to potential OWEI in the California Current System portion of the U.S. Pacific Outer Continental Shelf (POCS). Using population size, demography, life history, flight heights, and avoidance behavior for 62 seabird and 19 mar
Authors
Emily C. Kelsey, Jonathan J. Felis, Max Czapanskiy, David M. Peresksta, Josh Adams

U.S. Geological Survey energy and wildlife research annual report for 2018

USGS scientists provide scientific information and options that land and resource managers and private industries can use to make decisions regarding the development of energy resources while protecting the health of ecosystems. Studies focus on delivering information to avoid, minimize, or mitigate the impacts of energy infrastructure on fish and wildlife. USGS scientists are currently developing

Evidence that climate sets the lower elevation range limit in a high‐elevation endemic salamander

A frequent assumption in ecology is that biotic interactions are more important than abiotic factors in determining lower elevational range limits (i.e., the “warm edge” of a species distribution). However, for species with narrow environmental tolerances, theory suggests the presence of a strong environmental gradient can lead to persistence, even in the presence of competition. The relative impo
Authors
Evan H. Campbell Grant, Adrianne B. Brand, Stephan F. J. De Wekker, Temple R. Lee, John E. B. Wofford

State‐space modelling of the flight behaviour of a soaring bird provides new insights to migratory strategies

Characterising the spatiotemporal variation of animal behaviour can elucidate the way individuals interact with their environment and allocate energy. Increasing sophistication of tracking technologies paired with novel analytical approaches allows the characterisation of movement dynamics even when an individual is not directly observable.In this study, high‐resolution movement data collected via
Authors
Enrico Pirotta, Todd E. Katzner, Tricia A. Miller, Adam E. Duerr, Melissa A. Braham, Leslie New

Juvenile Chinook salmon and forage fish use of eelgrass habitats in a diked and channelized Puget Sound River Delta

Eelgrass Zostera marina can form extensive meadows on Puget Sound river deltas. The extent to which these meadows provide critical rearing habitat for local estuarine fishes, especially out‐migrating juvenile salmon, is not well understood. Further, delta eelgrass has been impacted by diking and river channelization with unknown consequences for fish. We sampled fish in the Skagit River delta, Was
Authors
Stephen P. Rubin, Michael C. Hayes, Eric E. Grossman

Identifying optimal hauling densities for adult Chinook Salmon trap and haul operations

Trap and haul programs are used to conserve fish populations by circumventing high mortality locations or events, and enhancing population abundance by reintroducing fish to historical habitats and mitigating for fish passage limitations. Spring run Chinook Salmon are transported in trucks upstream of barrier dams in Willamette River Tributaries as part of fish conservation efforts. Fish mortali
Authors
Michael Colvin, James Peterson, Cameron Sharpe, Michael L. Kent, Carl B. Schreck

Insight into infectious hematopoietic necrosis virus (IHNV) in Chinese rainbow trout aquaculture from virus isolated from 7 provinces in 2010–2014

The aquatic rhabdovirus infectious hematopoietic necrosis virus (IHNV) currently causes substantial fish losses in Chinese coldwater aquaculture. While IHNV was first reported in China in 1985 and has since undergone considerable spread, little is known about the underlying epidemiological patterns like introduction sources and transmission routes. In this study, we examined epidemiological and ph
Authors
Peng Jia, Rachel B. Breyta, Qing Li, Xu Qian, Bing Wu, Wei Zheng, Zhiqing Wen, Ying Liu, Gael Kurath, Qunyi Hua, Ningyi Jin, Hong Liu

Responses of hatchery‐ and natural‐origin adult spring Chinook Salmon to a trap‐and‐haul reintroduction program

The construction of impassable dams severely affected many Pacific salmon Oncorhynchus spp. populations, resulting in reintroduction efforts that are now focused on returning anadromous fish to areas located upstream of these dams. A primary strategy for moving adult salmon and steelhead O. mykiss around a dam or multiple dams involves trapping fish downstream and transporting them to upstream are
Authors
Tobias J. Kock, Russell W. Perry, Adam C. Pope, John D. Serl, Mike Kohn, Theresa L. Liedtke

Flow-mediated effects on travel time, routing, and survival of juvenile Chinook salmon in a spatially complex, tidally forced river delta

We evaluated the interacting influences of river flows and tides on travel time, routing, and survival of juvenile late-fall Chinook salmon (Oncorhynchus tshawytscha) migrating through the Sacramento–San Joaquin River Delta. To quantify these effects, we jointly modeled the travel time, survival, and migration routing in relation to individual time-varying covariates of acoustic-tagged salmon with
Authors
Russell W. Perry, Adam C. Pope, Jason G. Romine, Patricia L. Brandes, Jon R. Burau, Aaron R. Blake, Arnold J. Ammann, Cyril J. Michel

Herring Disease Program, February 1, 2018 - January 31, 2019

This report describes our laboratory and field results for the period February 1, 2018-January 31, 2019.
Authors
Paul Hershberger, Maureen Purcell
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