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Publications

Find out more about Species Management Research Program through our publications. Browse the entire list below or by specific topics at the links below.

Filter Total Items: 653

A detailed risk assessment of shale gas development on headwater streams in the Pennsylvania portion of the Upper Susquehanna River Basin, U.S.A.

The development of unconventional oil and gas (UOG) involves infrastructure development (well pads, roads and pipelines), well drilling and stimulation (hydraulic fracturing), and production; all of which have the potential to affect stream ecosystems. Here, we developed a fine-scaled (1:24,000) catchment-level disturbance intensity index (DII) that included 17 measures of UOG capturing all steps
Authors
Kelly O. Maloney, John A. Young, Stephen Faulkner, Atesmachew Hailegiorgis, E. Terrence Slonecker, Lesley Milheim

Gene transcription patterns in response to low level petroleum contaminants in Mytilus trossulus from field sites and harbors in southcentral Alaska

The 1989 Exxon Valdez oil spill damaged a wide range of natural resources, including intertidal communities, and post-spill studies demonstrated acute and chronic exposure and injury to an array of species. Standard toxicological methods to evaluate petroleum contaminants have assessed tissue burdens, with fewer assays providing indicators of health or physiology, particularly when contaminant lev
Authors
Lizabeth Bowen, A. Keith Miles, Brenda E. Ballachey, Shannon C. Waters, James L. Bodkin, Mandy Lindeberg, Daniel Esler

Satellite-tagged osprey nearly sets longevity record and productivity response to initial captures

We equipped adult Ospreys (Pandion haliaetus) from 24 nests in Oregon/Washington with satellite-tracked battery-powered radios, known as platform transmitter terminals (PTTs), in 1996–1999. These Ospreys from the lower Columbia River (river miles 76–286), and the Willamette Valley in western Oregon were part of a larger study of Osprey fall migration, wintering ecology, and spring migration, which
Authors
Charles J. Henny, Mark S. Martell

Detection of Nanophyetus salmincola in water, snails, and fish tissues by quantitative polymerase chain reaction

We report the development and validation of two quantitative PCR (qPCR) assays to detect Nanophyetus salmincola DNA in water samples and in fish and snail tissues. Analytical and diagnostic validation demonstrated good sensitivity, specificity, and repeatability of both qPCR assays. The N. salmincola DNA copy number in kidney tissue was significantly correlated with metacercaria counts based on mi
Authors
Maureen K. Purcell, Rachel L. Powers, Bonnie Besijn, Paul K. Hershberger

Greater sage-grouse (Centrocercus urophasianus) nesting and brood-rearing microhabitat in Nevada and California—Spatial variation in selection and survival patterns

Greater sage-grouse (Centrocercus urophasianus; hereinafter, "sage-grouse") are highly dependent on sagebrush (Artemisia spp.) dominated vegetation communities for food and cover from predators. Although this species requires the presence of sagebrush shrubs in the overstory, it also inhabits a broad geographic distribution with significant gradients in precipitation and temperature that drive var
Authors
Peter S. Coates, Brianne E. Brussee, Mark A. Ricca, Jonathan E. Dudko, Brian G. Prochazka, Shawn P. Espinosa, Michael L. Casazza, David J. Delehanty

A projection of lesser prairie chicken (Tympanuchus pallidicinctus) populations range-wide

We built a population viability analysis (PVA) model to predict future population status of the lesser prairie-chicken (Tympanuchus pallidicinctus, LEPC) in four ecoregions across the species’ range. The model results will be used in the U.S. Fish and Wildlife Service's (FWS) Species Status Assessment (SSA) for the LEPC. Our stochastic projection model combined demographic rate estimates from prev
Authors
Jonathan W. Cummings, Sarah J. Converse, Clinton T. Moore, David R. Smith, Clay T. Nichols, Nathan L. Allan, Chris M. O'Meilia

Synthesis of downstream fish passage information at projects owned by the U.S. Army Corps of Engineers in the Willamette River Basin, Oregon

The U.S. Army Corps of Engineers (USACE) operates the Willamette Valley Project (Project) in northwestern Oregon, which includes a series of dams, reservoirs, revetments, and fish hatcheries. Project dams were constructed during the 1950s and 1960s on rivers that supported populations of spring Chinook salmon (Oncorhynchus tshawytscha), winter steelhead (O. mykiss), and other anadromous fish speci
Authors
Amy C. Hansen, Tobias J. Kock, Gabriel S. Hansen

An assessment of food habits, prey availability, and nesting success of golden eagles within the Desert Renewable Energy Conservation Plan Area

Within the Desert Renewable Energy Conservation Plan area, which encompasses California’s Mojave Desert, development and operation of renewable energy facilities has the potential to impact golden eagle (Aquila chrysaetos) populations through loss of habitat and prey base. Developing an effective conservation strategy that aims to mitigate for such operations is necessary to lessen these impacts;
Authors
Kathleen M. Longshore, Todd C. Esque, Kenneth E. Nussear, Diego R. Johnson, Matthew Simes, Rich Inman

Status and trends of adult Lost River (Deltistes luxatus) and shortnose (Chasmistes brevirostris) sucker populations in Upper Klamath Lake, Oregon, 2015

Executive SummaryData from a long-term capture-recapture program were used to assess the status and dynamics of populations of two long-lived, federally endangered catostomids in Upper Klamath Lake, Oregon. Lost River suckers (LRS; Deltistes luxatus) and shortnose suckers (SNS; Chasmistes brevirostris) have been captured and tagged with passive integrated transponder (PIT) tags during their spawni
Authors
David A. Hewitt, Eric C. Janney, Brian S. Hayes, Alta C. Harris

Reclamation after oil and gas development does not speed up succession or plant community recovery in big sagebrush ecosystems in Wyoming

Article for intended outlet: Restoration Ecology. Abstract: Reclamation is an application of treatment(s) following a disturbance to promote succession and accelerate the return of target conditions. Previous studies have framed reclamation in the context of succession by studying its effectiveness in re-establishing late-successional plant communities. Re-establishment of these plant communities
Authors
Caitlin M. Rottler, Ingrid C. Burke, Kyle A. Palmquist, John B. Bradford, William K. Lauenroth

Snake River Fall Chinook Salmon life history investigations

Predation by nonnative fishes is one factor that has been implicated in the decline of juvenile salmonids in the Pacific Northwest. Impoundment of much of the Snake and Columbia rivers has altered food webs and created habitat favorable for species such as Smallmouth Bass Micropterus dolomieu. Smallmouth Bass are common throughout the Columbia River basin and have become the most abundant predator
Authors
John M. Erhardt, Brad K. Bickford, Rulon J. Hemingway, Tobyn N. Rhodes, Kenneth F. Tiffan

Research, monitoring, and evaluation of emerging issues and measures to recover the Snake River Fall Chinook Salmon ESU, 1/1/2016 - 12/31/2016

The portion of the Snake River fall Chinook Salmon Oncorhynchus tshawytscha ESU that spawns upstream of Lower Granite Dam transitioned from low to high abundance during 1992–2016 in association with U.S. Endangered Species Act recovery efforts and other federally mandated actions. This annual report focuses on (1) numeric and habitat use responses by natural- and hatchery-origin spawners, (2) phen
Authors
William P. Connor, Frank L. Mullins, Kenneth F. Tiffan, John M. Plumb, Russell W. Perry, John M. Erhardt, Rulon J. Hemingway, Brad K. Bickford, Tobyn N. Rhodes