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Publications

Find out more about Species Management Research Program through our publications. Browse the entire list below or by specific topics at the links below.

Filter Total Items: 653

Trophic interactions and consumption rates of subyearling Chinook Salmon and nonnative juvenile American Shad in Columbia River reservoirs

We used a large lampara seine coupled with nonlethal gastric lavage to examine the diets and estimate consumption rates of subyearling Chinook Salmon Oncorhynchus tshawytscha during July and August 2013. During August we also examined the diet and consumption rates of juvenile American Shad Alosa sapidissima, a potential competitor of subyearling Chinook Salmon. Subyearling Chinook Salmon consumed
Authors
Craig A. Haskell, David A. Beauchamp, Stephen M Bollins

A method to assess the population-level consequences of wind energy facilities on bird and bat species

For this study, a methodology was developed for assessing impacts of wind energy generation on populations of birds and bats at regional to national scales. The approach combines existing methods in applied ecology for prioritizing species in terms of their potential risk from wind energy facilities and estimating impacts of fatalities on population status and trend caused by collisions with wind
Authors
James E. Diffendorfer, Julie A. Beston, Matthew D. Merrill, Jessica C. Stanton, M.D. Corum, Scott R. Loss, Wayne E. Thogmartin, Douglas H. Johnson, Richard A. Erickson, Kevin W. Heist

Detecting Renibacterium salmoninarum in wild brown trout by use of multiple organ samples and diagnostic methods

Renibacterium salmoninarum, the causative agent of salmonid bacterial kidney disease (BKD), is endemic in many wild trout species in northerly regions. The aim of the present study was to determine the optimal R. salmoninarum sampling/testing strategy for wild brown trout (Salmo trutta L.) populations in Iceland. Fish were netted in a lake and multiple organs—kidney, spleen, gills, oesophagus and
Authors
S. Guomundsdottir, Lynn M. Applegate, I.O. Arnason, A. Kristmundsson, Maureen K. Purcell, Diane G. Elliott

Collar temperature sensor data reveal long-term patterns in southern Beaufort Sea polar bear den distribution on pack ice and land

In response to a changing climate, many species alter habitat use. Polar bears Ursus maritimus in the southern Beaufort Sea have increasingly used land for maternal denning. To aid in detecting denning behavior, we developed an objective method to identify polar bear denning events using temperature sensor data collected by satellite-linked transmitters deployed on adult females between 1985 and 2
Authors
Jay W Olson, Karyn D. Rode, Dennis L. Eggett, T. S. Smith, R. R. Wilson, George M. Durner, Anthony S. Fischbach, Todd C. Atwood, David C. Douglas

Inhibition of an aquatic rhabdovirus demonstrates promise of a broad-spectrum antiviral for use in aquaculture

Many enveloped viruses cause devastating disease in aquaculture, resulting in significant economic impact. LJ001 is a broad-spectrum antiviral compound that inhibits enveloped virus infections by specifically targeting phospholipids in the lipid bilayer via the production of singlet oxygen (1O2). This stabilizes positive curvature and decreases membrane fluidity, which inhibits virus-cell membrane
Authors
Bethany F. Balmer, Rachel L. Powers, Ting-Hu Zhang, Jihye Lee, Frederic Vigant, Benhur Lee, Michael E. Jung, Maureen K. Purcell, Kevin Snekvik, Hector C. Aguilar

Potential distribution of the viral haemorrhagic septicaemia virus in the Great Lakes region

Viral haemorrhagic septicaemia virus (VHSV) genotype IVb has been responsible for large-scale fish mortality events in the Great Lakes of North America. Anticipating the areas of potential VHSV occurrence is key to designing epidemiological surveillance and disease prevention strategies in the Great Lakes basin. We explored the environmental features that could shape the distribution of VHSV, base
Authors
Luis E. Escobar, Gael Kurath, Joaquim Escobar-Dodero, Meggan E. Craft, Nicholas B.D. Phelps

Preliminary evaluation of the behavior and movements of adult spring Chinook salmon in the Chehalis River, southwestern Washington, 2014

Recent interest in flood control and restoration strategies in the Chehalis River Basin has increased the need to understand the current status and ecology of spring Chinook salmon (Oncorhynchus tshawytscha). Spring Chinook salmon have the longest exposure of all adult Chinook salmon life histories to the low-flow and high water temperature conditions that typically occur during summer. About 100
Authors
Theresa L. Liedtke, William R. Hurst, Ryan G. Tomka, Tobias J. Kock, Mara S. Zimmerman

Cross-scale phenological data integration to benefit resource management and monitoring

Climate change is presenting new challenges for natural resource managers charged with maintaining sustainable ecosystems and landscapes. Phenology, a branch of science dealing with seasonal natural phenomena (bird migration or plant flowering in response to weather changes, for example), bridges the gap between the biosphere and the climate system. Phenological processes operate across scales tha
Authors
Andrew D. Richardson, Jake F. Weltzin, Jeffrey T. Morisette

A comparison of honey bee-collected pollen from working agricultural lands using light microscopy and ITS metabarcoding

Taxonomic identification of pollen has historically been accomplished via light microscopy but requires specialized knowledge and reference collections, particularly when identification to lower taxonomic levels is necessary. Recently, next-generation sequencing technology has been used as a cost-effective alternative for identifying bee-collected pollen; however, this novel approach has not been
Authors
Matthew Smart, Robert S. Cornman, Deborah D. Iwanowicz, Margaret McDermott-Kubeczko, Jeff S Pettis, Marla S Spivak, Clint R.V. Otto

Operationalizing the telecoupling framework for migratory species using the spatial subsidies approach to examine ecosystem services provided by Mexican free-tailed bats

Drivers of environmental change in one location can have profound effects on ecosystem services and human well-being in distant locations, often across international borders. The telecoupling provides a conceptual framework for describing these interactions—for example, locations can be defined as sending areas (sources of flows of ecosystem services, energy, or information) or receiving areas (re
Authors
Laura Lopez Hoffman, James E. Diffendorfer, Ruscena Widerholt, Wayne E. Thogmartin, Gary McCraken, Rodrigo Medellin, Kenneth J. Bagstad, Amy Russell, Darius J. Semmens

Replication and shedding kinetics of infectious hematopoietic necrosis virus in juvenile rainbow trout

Viral replication and shedding are key components of transmission and fitness, the kinetics of which are heavily dependent on virus, host, and environmental factors. To date, no studies have quantified the shedding kinetics of infectious hematopoietic necrosis virus (IHNV) in rainbow trout (Oncorhynchus mykiss), or how they are associated with replication, making it difficult to ascertain the tran
Authors
Andrew R. Wargo, Robert J. Scott, Benjamin Kerr, Gael Kurath