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Publications

Find out more about Species Management Research Program through our publications. Browse the entire list below or by specific topics at the links below.

Filter Total Items: 653

Relative energy production determines effect of repowering on wildlife mortality at wind energy facilities

Reduction in wildlife mortality is often cited as a potential advantage to repowering wind facilities, that is, replacing smaller, lower capacity, closely spaced turbines, with larger, higher capacity ones, more widely spaced. Wildlife mortality rates, however, are affected by more than just size and spacing of turbines, varying with turbine operation, seasonal and daily weather and habitat, all o
Authors
Manuela Huso, Tara Conkling, Daniel Dalthorp, Melanie J Davis, Heath Smith, Amy Fesnock-Parker, Todd E. Katzner

Exploration of the 2016 Yellowstone River fish kill and proliferative kidney disease in wild fish populations

Proliferative kidney disease (PKD) is an emerging disease that recently resulted in a large mortality event of salmonids in the Yellowstone River (Montana, USA). Total PKD fish mortalities in the Yellowstone River were estimated in the tens of thousands, which resulted in a multi‐week river closure and an estimated economic loss of US$500,000. This event shocked scientists, managers, and the publi
Authors
Patrick Ross Hutchins, Adam Sepulveda, Hanna Hartikainen, Ken D. Staigmiller, Scott T. Opitz, Renee M. Yamamoto, Amberly Huttinger, Rick J. Cordes, Tammy Weiss, Lacey R. Hopper, Maureen K. Purcell, Beth Okamura

A systematic review of potential habitat suitability for the jaguar Panthera onca in central Arizona and New Mexico, USA

In April 2019, the U.S. Fish and Wildlife Service (USFWS) released its recovery plan for the jaguar Panthera onca after several decades of discussion, litigation and controversy about the status of the species in the USA. The USFWS estimated that potential habitat, south of the Interstate-10 highway in Arizona and New Mexico, had a carrying capacity of c. six jaguars, and so focused its recovery p
Authors
Eric W Sanderson, Kim Fisher, Rob Peters, Jon P. Beckmann, Bryan Bird, Curtis Bradley, Juan Bravo, Melissa M. Grigione, James Hatten, Carlos Gonzalez, Kurt Menke, Jennie Miller, Philip Miller, Cristina Mormorunni, Michael Robinson, Robert E Thomas, Sharon Wilcox

Using bottom trawls to monitor subsurface water clarity in marine ecosystems

Biophysical processes that affect subsurface water clarity play a key role in ecosystem function. However, subsurface water clarity is poorly monitored in marine ecosystems because doing so requires in-situ sampling that is logistically difficult to conduct and sustain. Novel solutions are thus needed to improve monitoring of subsurface water clarity. To that end, we developed a sampling method an
Authors
Sean K. Rohan, Stan Kotwicki, Kelly A. Kearney, Jennifer A Schulien, Edward A. Laman, Edward D. Cokelet, David Beauchamp, Lyle L. Britt, Kerim Y. Aydin, Stephani G. Zador

Analytical validation of two RT-qPCR tests and detection of spring viremia of carp virus (SVCV) in persistently infected koi Cyprinus carpio

Spring viremia of carp virus (SVCV) ia a carp sprivivirus and a member of the genus Sprivivirus within the family Rhabdoviridae. The virus is the etiological agent of spring viremia of carp, a disease of cyprinid species including koi Cyprinus carpio L. and notifiable to the World Organisation for Animal Health. The goal of this study was to explore hypotheses regarding inter-genogroup (Ia to Id)
Authors
Sharon C Clouthier, Tamara Schroeder, Emma K Bueren, Eric D. Anderson, Eveline Emmenegger

Fish Rhabdoviruses (Rhabdoviridae)

The family Rhabdoviridae currently has 18 genera accepted by the International Committee for Virus Taxonomy (ICTV), and three of those genera contain fish rhabdoviruses. In the genera Novirhabdovirus, Sprivivirus, and Perhabdovirus all viruses infect fish hosts, and there are no fish viruses in any of the other 15 rhabdovirus genera. In the overall phylogeny of the Rhabdoviridae the three fish vir
Authors
Gael Kurath, David B. Stone

Evaluating fish rescue as a drought adaptation strategy using a life cycle modeling approach for imperiled coho salmon

Projected intensification of drought as a result of climate change may reduce the capacity of streams to rear fish, exacerbating the challenge of recovering salmonid populations listed under the Endangered Species Act. Without management intervention, some stocks will likely go extinct as stream drying and fragmentation reduce juvenile survival to unsustainable levels. To offset drought‐related mo
Authors
Brittany A Beebe, Kale T Bentley, Thomas W. Buehrens, Russell Perry, Jonathan B. Armstrong

Performance of subyearling fall Chinook salmon tagged with 8‐, 9‐, and 12‐mm passive integrated transponder tags in the Snake River

Inferences based on tagged individuals from a population are limited in part by the minimum size of fish that can be tagged. Smaller tags allow a greater proportion of a population to be represented by tagging and should reduce potential tag effects on fish performance. We evaluated different performance metrics of juvenile fall Chinook Salmon Oncorhynchus tshawytscha tagged with 8‐, 9‐, and 12‐mm
Authors
Kenneth Tiffan, Tobyn Rhodes, Brad Bickford, Dalton Dirk Lebeda, William P. Connor, Frank L. Mullins

Hybridization between historically allopatric Chinook salmon populations in the White Salmon River, WA

Chinook Salmon spawning in the White Salmon River consist of members of three historically distinct populations: spring Chinook Salmon, Tule fall Chinook Salmon and Upriver Bright (URB) fall Chinook Salmon. Previous work examined juveniles captured in 2006-2008 and reported hybridization between introduced URBs, and the native threatened Tules. Recent increases in nearby hatchery URB release numbe
Authors
Christian A. Smith, Jennifer Von Bargen, Justin H. Bohling, David Hand, Ian Jezorek

Eagle fatalities are reduced by automated curtailment of wind turbines

Collision‐caused fatalities of animals at wind power facilities create a ‘green versus green’ conflict between wildlife conservation and renewable energy. These fatalities can be mitigated via informed curtailment whereby turbines are slowed or stopped when wildlife are considered at increased risk of collision. Automated monitoring systems could improve efficacy of informed curtailment, yet such
Authors
Christopher J W McClure, Brian W Roleck, Leah Dunn, Jennifer D McCabe, Luke Martinson, Todd E. Katzner

2011 Georgiana Slough non-physical barrier performance evaluation project report

The Sacramento River and its tributaries support populations of anadromous fish species including winter-run, spring-run, fall-run, and late fall–run Chinook salmon (Oncorhynchus tshawytscha); and steelhead (O. mykiss). Several of these species are listed as threatened or endangered under the California Endangered Species Act (CESA), federal Endangered Species Act (ESA), or both. These species spa
Authors
Jason G. Romine, Russell W. Perry, Theresa L. Liedtke

Juvenile Chinook salmon survival, travel time, and floodplain use relative to riverine channels in the Sacramento–San Joaquin River Delta

Floodplains provide multiple benefits to both resident and migratory fish species, including juvenile Chinook Salmon Oncorhynchus tshawytscha, but direct comparisons of survival during migration through a floodplain versus riverine routes are scarce. The Yolo Bypass is a broad floodplain of the Sacramento River that floods in about 30% of years in response to large, uncontrolled runoff events. We
Authors
Adam Pope, Russell Perry, Brett N. Harvey, Dalton Hance, Hal C Hansel