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Publications

Below is a list of available CRRL peer reviewed and published science.

Filter Total Items: 524

Anesthesia of juvenile Pacific Lampreys with MS-222, BENZOAK, AQUI-S 20E, and Aquacalm

Effective anesthetics are a critical component of safe and humane fish handling procedures. We tested three concentrations each of four anesthetics—Finquel (tricaine methanesulfonate, herein referred to as MS-222), BENZOAK (20% benzocaine), AQUI-S 20E (10% eugenol), and Aquacalm (metomidate hydrochloride)—for efficacy and safety in metamorphosed, outmigrating juvenile Pacific Lampreys Entosphenus
Authors
Helena E. Christiansen, Lisa P. Gee, Matthew G. Mesa

An ecohydraulic model to identify and monitor moapa dace habitat

Moapa dace (Moapa coriacea) is a critically endangered thermophilic minnow native to the Muddy River ecosystem in southeastern Nevada, USA. Restricted to temperatures between 26.0 and 32.0°C, these fish are constrained to the upper two km of the Muddy River and several small tributaries fed by warm springs. Habitat alterations, nonnative species invasion, and water withdrawals during the 20th cent
Authors
James R. Hatten, Thomas R. Batt, Gayton G. Scoppettone, Christopher J. Dixon

Adjusting survival estimates for premature transmitter failure: A case study from the Sacramento-San Joaquin Delta

In telemetry studies, premature tag failure causes negative bias in fish survival estimates because tag failure is interpreted as fish mortality. We used mark-recapture modeling to adjust estimates of fish survival for a previous study where premature tag failure was documented. High rates of tag failure occurred during the Vernalis Adaptive Management Plan’s (VAMP) 2008 study to estimate survival
Authors
Christopher M. Holbrook, Russell W. Perry, Patricia L. Brandes, Noah S. Adams

Potential effects of changes in temperature and food resources on life history trajectories of juvenile Oncorhynchus mykiss

Increasing temperatures and changes in food resources owing to climate change may alter the growth and migratory behavior of organisms. This is particularly important for salmonid species like Oncorhynchus mykiss, where some individuals remain in freshwater to mature (nonanadromous Rainbow Trout) and others migrate to sea (anadromous Steelhead). Whether one strategy is adopted over the other may d
Authors
Joseph R. Benjamin, Patrick J. Connolly, Jason G. Romine, Russell W. Perry

Conservation and Ecology of Marine Forage Fishes--Proceedings of a Research Symposium, September 2012

Locally and globally, there is growing recognition of the critical roles that herring, smelt, sand lance, eulachon, and other forage fishes play in marine ecosystems. Scientific and resource management entities throughout the Salish Sea, agree that extensive information gaps exist, both in basic biological knowledge and parameters critical to fishery management. Communication and collaboration amo
Authors
Theresa Liedtke, Caroline Gibson, Dayv Lowry, Duane Fagergren

The floodplain food web mosaic: a study of its importance to salmon and steelhead with implications for their recovery

Although numerous studies have attempted to place species of interest within the context of food webs, such efforts have generally occurred at small scales or disregard potentially important spatial heterogeneity. If food web approaches are to be employed to manage species, studies are needed that evaluate the multiple habitats and associated webs of interactions in which these species participate
Authors
J. Ryan Bellmore, Colden V. Baxter, Kyle Martens, Patrick J. Connolly

Development of a database-driven system for simulating water temperature in the lower Yakima River main stem, Washington, for various climate scenarios

A model for simulating daily maximum and mean water temperatures was developed by linking two existing models: one developed by the U.S. Geological Survey and one developed by the Bureau of Reclamation. The study area included the lower Yakima River main stem between the Roza Dam and West Richland, Washington. To automate execution of the labor-intensive models, a database-driven model automation
Authors
Frank Voss, Alec Maule

Status and trends monitoring of the mainstem Columbia River: sample frame development and review of programs relevant to the development of an integrated approach to monitoring

Implementing an Integrated Status and Trends Monitoring program (ISTM) for the mainstem Columbia River will help identify trends in important natural resources and help us understand the long-term collective effects of management actions. In this report, we present progress towards the completion of a stepwise process that will facilitate the development of an ISTM for the mainstem Columbia Ri
Authors
Timothy D. Counihan, Jill M. Hardiman, Stephen Waste

Identifying when tagged fishes have been consumed by piscivorous predators: application of multivariate mixture models to movement parameters of telemetered fishes

Background Consumption of telemetered fishes by piscivores is problematic for telemetry studies because tag detections from the piscivore could introduce bias into the analysis of telemetry data. We illustrate the use of multivariate mixture models to estimate group membership (smolt or predator) of telemetered juvenile Chinook salmon (Oncorhynchus tshawytscha), juvenile steelhead trout (O. mykis
Authors
Jason G. Romine, Russell W. Perry, Samuel V. Johnston, Christopher W. Fitzer, Stephen W. Pagliughi, Aaron R. Blake

Fluvial rainbow trout contribute to the colonization of steelhead (Oncorhynchus mykiss) in a small stream

Life history polymorphisms provide ecological and genetic diversity important to the long term persistence of species responding to stochastic environments. Oncorhynchus mykiss have complex and overlapping life history strategies that are also sympatric with hatchery populations. Passive integrated transponder (PIT) tags and parentage analysis were used to identify the life history, origin (hatche
Authors
Dana E. Weigel, Patrick J. Connolly, Madison S. Powell

Report A: Fish distribution and population dynamics in Rock Creek, Klickitat County, Washington

The U.S. Geological Survey collaborated with the Yakama Nation starting in fall of 2009 to study the fish populations in Rock Creek, a Washington State tributary of the Columbia River 21 kilometers upstream of John Day Dam. Prior to this study, very little was known about the ESA-listed (threatened) Mid-Columbia River steelhead (Oncorhynchus mykiss) population in this arid watershed with intermitt
Authors
Brady Allen, Carrie S. Munz, Elaine Harvey

Telemetry techniques: A user guide for fisheries research

Telemetry provides a powerful and flexible tool for studying fish and other aquatic animals, and its use has become increasingly commonplace. However, telemetry is gear intensive and typically requires more specialized knowledge and training than many other field techniques. As with other scientific methods, collecting good data is dependent on an understanding of the underlying principles behind