Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42216
The role of virulence for in vivo superinfection fitness of a vertebrate RNA virus The role of virulence for in vivo superinfection fitness of a vertebrate RNA virus
We have developed a novel, in vivo superinfection fitness assay to examine superinfection dynamics and the role of virulence in superinfection fitness. This assay involves controlled, sequential infections of a natural, vertebrate host, Oncorhynchus mykiss (rainbow trout), with variants of a co-evolved viral pathogen, infectious hematopoietic necrosis virus (IHNV). Intervals between...
Authors
Alison M. Kell, Andrew R. Wargo, Gael Kurath
Colonization of steelhead in a natal stream after barrier removal Colonization of steelhead in a natal stream after barrier removal
Colonization of vacant habitats is an important process for supporting the long-term persistence of populations and species. We used a before–after experimental design to follow the process of colonization by steelhead Oncorhynchus mykiss (anadromous Rainbow Trout) at six monitoring sites in a natal stream, Beaver Creek, after the modification or removal of numerous stream passage...
Authors
Dana E. Weigel, Patrick J. Connolly, Kyle D. Martens, Madison S. Powell
Tracking sedimentation from the historic A.D. 2011 Mississippi River flood in the deltaic wetlands of Louisiana, USA Tracking sedimentation from the historic A.D. 2011 Mississippi River flood in the deltaic wetlands of Louisiana, USA
Management and restoration of the Mississippi River deltaic plain (southern United States) and associated wetlands require a quantitative understanding of sediment delivery during large flood events, past and present. Here, we investigate the sedimentary fingerprint of the 2011 Mississippi River flood across the Louisiana coast (Atchafalaya Delta, Terrebonne, Barataria, and Mississippi...
Authors
Nicole S. Khan, Benjamin P. Horton, Karen L. McKee, Douglas Jerolmack, Federico Falcini, Mihaela D. Enache, Christopher H. Vane
Catching air - those magnificent jumping Suwannee sturgeons Catching air - those magnificent jumping Suwannee sturgeons
No abstract available.
Authors
K. J. Sulak
Rediscovering traditional vegetation management in preserves: trading experiences between cultures and continents Rediscovering traditional vegetation management in preserves: trading experiences between cultures and continents
Land managers are grappling with massive changes in vegetation structure, particularly in protected areas formerly subjected to fire and grazing. The objective of this review was to compare notes on the historical and current management of ecosystems around the world (especially in wet to dry grasslands in the Americas, Australia, Africa, Europe and Asia) with respect to the usage of...
Authors
Beth A. Middleton
Evolution of a reassortant North American gull influenza virus lineage: drift, shift and stability Evolution of a reassortant North American gull influenza virus lineage: drift, shift and stability
Background: The role of gulls in the ecology of avian influenza (AI) is different than that of waterfowl. Different constellations of subtypes circulate within the two groups of birds and AI viruses isolated from North American gulls frequently possess reassortant genomes with genetic elements from both North America and Eurasian lineages. A 2008 isolate from a Newfoundland Great Black...
Authors
Jeffrey S. Hall, Joshua L. TeSlaa, Sean W. Nashold, Rebecca A. Halpin, Timothy Stockwell, David E. Wentworth, Vivien Dugan, Hon S. Ip
Sediment accretion rates and sediment composition in Prairie Pothole wetlands under varying land use practices, Montana, United States Sediment accretion rates and sediment composition in Prairie Pothole wetlands under varying land use practices, Montana, United States
Increased sedimentation and nutrient cycle changes in Prairie Pothole Region wetlands associated with agriculture threaten the permanence and ecological functionality of these important resources. To determine the effects of land use on sedimentation and nutrient cycling, soil cores were analyzed for cesium-137 (137Cs), lead-210 (210Pb), and potassium-40 (40K) activities; textural...
Authors
T.M. Preston, R.S. Sojda, R.A. Gleason
Contaminants assessment in the coral reefs of Virgin Islands National Park and Virgin Islands Coral Reef National Monument Contaminants assessment in the coral reefs of Virgin Islands National Park and Virgin Islands Coral Reef National Monument
Coral, fish, plankton, and detritus samples were collected from coral reefs in Virgin Islands National Park (VIIS) and Virgin Islands Coral Reef National Monument (VICR) to assess existing contamination levels. Passive water sampling using polar organic chemical integrative samplers (POCIS) and semi-permeable membrane devices found a few emerging pollutants of concern (DEET and...
Authors
Timothy A. Bargar, Virginia H. Garrison, David A. Alvarez, Kathy Echols
Interactions between brown bears and chum salmon at McNeil River, Alaska Interactions between brown bears and chum salmon at McNeil River, Alaska
Predation on returning runs of adult salmon (Oncorhynchus spp.) can have a large influence on their spawning success. At McNeil River State Game Sanctuary (MRSGS), Alaska, brown bears (Ursus arctos) congregate in high numbers annually along the lower McNeil River to prey upon returning adult chum salmon (O. keta). Low chum salmon escapements into McNeil River since the late 1990s have...
Authors
Joshua Peirce, Edward O. Otis, Mark S. Wipfli, Erich H. Follmann
Tamarix and Diorhabda leaf beetle interactions: implications for Tamarix water use and riparian habitat Tamarix and Diorhabda leaf beetle interactions: implications for Tamarix water use and riparian habitat
Tamarix leaf beetles (Diorhabda carinulata) have been widely released on western United States rivers to control introduced shrubs in the genus Tamarix, with the goals of saving water through removal of an assumed high water-use plant, and of improving habitat value by removing a competitor of native riparian trees. We review recent studies addressing three questions: (1) to what extent...
Authors
Pamela Nagler, Edward P. Glenn
Estimating thermal regimes of bull trout and assessing the potential effects of climate warming on critical habitats Estimating thermal regimes of bull trout and assessing the potential effects of climate warming on critical habitats
Understanding the vulnerability of aquatic species and habitats under climate change is critical for conservation and management of freshwater systems. Climate warming is predicted to increase water temperatures in freshwater ecosystems worldwide, yet few studies have developed spatially explicit modelling tools for understanding the potential impacts. We parameterized a nonspatial model...
Authors
Leslie A. Jones, Clint C. Muhlfeld, Lucy A. Marshall, Brian L. McGlynn, Jeffrey L. Kershner
Taming wildlife disease: bridging the gap between science and management Taming wildlife disease: bridging the gap between science and management
1.Parasites and pathogens of wildlife can threaten biodiversity, infect humans and domestic animals, and cause significant economic losses, providing incentives to manage wildlife diseases. Recent insights from disease ecology have helped transform our understanding of infectious disease dynamics and yielded new strategies to better manage wildlife diseases. Simultaneously, wildlife...
Authors
Maxwell B. Joseph, Joseph R. Mihaljevic, Ana Lisette Arellano, Jordan G. Kueneman, Paul C. Cross, Pieter T.J. Johnson