Publications
Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS. Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.
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Surface fault displacement models for strike-slip faults
Fault displacement models (FDMs) are an essential component of the probabilistic fault displacement hazard analyses (PFDHA), much like ground motion models in the probabilistic seismic hazard analyses for ground motion hazards. In this study, we develop several principal surface FDMs for strike-slip earthquakes. The model development is based on analyses of the new and comprehensive fault displac
Authors
Brian S. J. Chiou, Rui Chen, Kate Thomas, Christopher W. D. Milliner, Timothy E. Dawson, Mark D. Petersen
Management of vampire bats and rabies: Past, present, and future
Rabies virus transmitted via the bite of common vampire bats (Desmodus rotundus) has surpassed canine-associated cases as the predominant cause of human rabies in Latin America. Cattle, the preferred prey of D. rotundus, suffer extensive mortality from vampire bat associated rabies, with annual financial losses estimated in the tens of millions of dollars. Organized attempts to manage or curtail v
Authors
Tonie E. Rocke, Daniel G. Streicker, Ariel Elizabeth Leon
Unzipping supercontinent Pangea: Geologic, potential field data, and buried structures, and a case for sequential Atlantic opening
Amalgamation of Pangea culminated with zippered N-to-S closing of the Theic ocean during the Alleghanian orogeny. Transpressional-rotational collision produced widespread dextral faulting throughout the eastern Appalachian hinterland, and thrust faulting in the western hinterland and foreland. The partially buried southern Appalachian Eastern Piedmont fault system is a product of late Paleozoic tr
Authors
Aaron G. Stubblefield, Robert D. Jr. Hatcher, J. Wright Horton,, David L. Daniels
The concept of land bridge marshes in the Mississippi River Delta and implications for coastal restoration
Louisiana has high coastal wetland loss rates due to natural processes such as subsidence and anthropogenic activities such as construction of river levees and dams, pervasive alteration of surface hydrology by local industries such as oil and gas, and navigation. With the exception of the Atchafalaya River discharge area, most of Louisiana's marsh coastline is retreating and coastal marshes are d
Authors
John W. Day, Robert R. Twilley, Angelina Freeman, Brady Couvillion, Tracy Quirk, Navid H. Jafari, Giulio Mariotti, Rachael Hunter, Charles Norman, G. Paul Kemp, John R. White, Ehab Meselhe
Inland water greenhouse gas budgets for RECCAP2: 2. Regionalization and homogenization of estimates
Inland waters are important sources of the greenhouse gasses (GHGs) carbon dioxide (CO2), methane (CH4) and nitrous oxide (N2O) to the atmosphere. In the framework of the 2nd phase of the REgional Carbon Cycle Assessment and Processes (RECCAP-2) initiative, we synthesize existing estimates of GHG emissions from streams, rivers, lakes and reservoirs, and homogenize them with regard to underlying gl
Authors
Ronny Lauerwald, George H. Allen, Bridget Deemer, Shaoda Liu, Taylor Maavara, Peter Raymond, Lewis Alcott, David Bastviken, Adam Hastie, Meredith A. Holgerson, Matthew S. Johnson, Bernhard Lehner, Peirong Lin, Alessandra Marzadri, Lishan Ran, Hanqin Tian, Xiao Yang, Yuanzhi Yao, Pierre Regnier
Multiple models for outbreak decision support in the face of uncertainty
Policymakers must make management decisions despite incomplete knowledge and conflicting model projections. Little guidance exists for the rapid, representative, and unbiased collection of policy-relevant scientific input from independent modeling teams. Integrating approaches from decision analysis, expert judgment, and model aggregation, we convened multiple modeling teams to evaluate COVID-19 r
Authors
Katriona Shea, Rebecca K. Borchering, William J M Probert, Emily Howerton, Tiffany L. Bogich, Shou-Li Li, Willem G. van Panhuis, Cecile Viboud, Ricardo Aguás, Artur A. Belov, Sanjana H. Bhargava, Sean M. Cavany, Joshua C. Chang, Cynthia Chen, Jinghui Chen, Shi Chen, YangQuan Chen, Lauren M. Childs, Carson C. Chow, Isabel Crooker, Sara Y. Del Valle, Guido España, Geoffrey Fairchild, Richard C. Gerkin, Timothy C. Germann, Quanquan Gu, Xiangyang Guan, Linhong Guo, Gregory R. Hart, Thomas J. Hladish, Nathaniel Hupert, Daniel Janies, Cliff C. Kerr, Daniel J. Klein, Eili Y. Klein, Gary Lin, Carrie Manore, Lauren A. Meyers, John E. Mittler, Kunpeng Mu, Rafael C. Nunez, Rachel J. Oidtman, Remy Pasco, Ana Pastore y Piontti, Rajib Paul, Carl A. B. Pearson, Dianela R. Perdomo, T. Alex Perkins, Kelly Pierce, Alexander N. Pillai, Rosalyn C. Rael, Katherine Rosenfeld, Chrysm W. Ross, Julie A. Spencer, Arlin B. Stoltzfus, Kok B. Toh, Shashaank Vattikuti, Alessandro Vespignani, Lingxiao Wang, Lisa J. White, X. Pan, Yupeng Yang, Osman N. Yogurtcu, Weitong Zhang, Yanting Zhao, Difan Zou, Matthew J. Ferrari, David Pannell, Michael J. Tildesley, J. Seiferth, Elyse Johnson, Matthew Biggerstaff, Michael A Johansson, Rachel B. Slayton, John Levander, Jeff Stazer, J. Kerr, Michael C. Runge
Inland water greenhouse gas budgets for RECCAP2: 1. State-of-the-art of global scale assessments
Inland waters are important sources of the greenhouse gasses (GHGs) carbon dioxide (CO2), methane (CH4) and nitrous oxide (N2O) to the atmosphere. In the framework of the 2nd phase of the REgional Carbon Cycle Assessment and Processes (RECCAP-2) initiative, we review the state of the art in estimating inland water GHG budgets at global scale, which has substantially advanced since the first phase
Authors
Ronny Lauerwald, George H. Allen, Bridget Deemer, Shaoda Liu, Taylor Maavara, Peter Raymond, Lewis Alcott, David Bastviken, Adam Hastie, Meredith A. Holgerson, Matthew S. Johnson, Bernhard Lehner, Peirong Lin, Alessandra Marzadri, Lishan Ran, Hanqin Tian, Xiao Yang, Yuanzhi Yao, Pierre Regnier
Groundwater prospecting using a multi-technique framework in the lower Casas Grandes Basin, Chihuahua, México
Groundwater is a strategic resource for economic development, social justice, environmental sustainability, and water governance. The lower Casas Grandes River Basin, located in the state of Chihuahua, México, is in a semi-arid region with increasing groundwater demand and regional challenges such as drought and depletion of aquifers. Even though there is official information about the availabilit
Authors
Alfredo Granados Olivas, Ezequiel Rascon-Mendoza, Francisco J. Gómez-Domínguez, Carlo I. Romero-Gameros, Andrew J. Robertson, Luis C. Bravo-Peña, Ali Mirchi, Ana C. Garcia-Vazquez, Alexander Fernald, John W. Hawley, Luis Alfonso Gandara-Ruiz, Luis C. Alatorre-Cejudo, Maryam Samimi, Felipe A. Vazquez-Galvez, Adan Pinales-Munguia, Oscar F. Ibañez-Hernandez, Josiah M. Heyman, Alex Mayer, William L. Hargrove
Near-field receiving-water monitoring of trace metals and a benthic community near the Palo Alto Regional Water Quality Control Plant in south San Francisco Bay, California—2020
Trace-metal concentrations in sediment and in the clam Limecola petalum (World Register of Marine Species, 2020; formerly reported as Macoma balthica and M. petalum), clam reproductive activity, and benthic macroinvertebrate community structure were investigated in a mudflat 1 kilometer (km) south of the discharge of the Palo Alto Regional Water Quality Control Plant (PARWQCP) in south San Francis
Authors
Daniel J. Cain, Marie Noële Croteau, Janet K. Thompson, Francis Parchaso, A. Robin Stewart, Emily L. Zierdt Smith, Kelly H. Shrader, Le H. Kieu, Samuel N. Luoma
Distribution and abundance of Southwestern Willow Flycatchers (Empidonax traillii extimus) on the upper San Luis Rey River, San Diego County, California—2022 data summary
Executive SummaryWe surveyed for Southwestern Willow Flycatchers (Empidonax traillii extimus; flycatcher) along the upper San Luis Rey River near Lake Henshaw in Santa Ysabel, California, in 2022. Surveys were completed at four locations: three downstream from Lake Henshaw, where surveys occurred from 2015 to 2021 (Rey River Ranch [RRR], Cleveland National Forest [CNF], Vista Irrigation District [
Authors
Scarlett L. Howell, Barbara E. Kus
Ambrosia beetles (Coleoptera: Curculionidae) can directly transmit the fungal pathogens responsible for Rapid ʻŌhiʻa Death
The ecologically and culturally vital tree species, ʻōhiʻa lehua (Metrosideros polymorpha), is threatened by the fungal pathogens Ceratocystis lukuohia and Ceratocystis huliohia, the causal agents of the disease complex called Rapid ʻŌhiʻa Death (ROD). Four invasive ambrosia beetle (Coleoptera: Curculionidae: Scolytinae) species in the Xyleborini tribe colonize ROD Ceratocystis-infested ‘ōhiʻa and
Authors
Kylle Roy, Kelly Jaenecke, Ellen Dunkle, Dan Mikros, Robert W. Peck
A novel assembly pipeline and functional annotations for targeted sequencing: A case study on the globally threatened Margaritiferidae (Bivalvia: Unionida)
The proliferation of genomic sequencing approaches has significantly impacted the field of phylogenetics. Target capture approaches provide a cost-effective, fast and easily applied strategy for phylogenetic inference of non-model organisms. However, several existing target capture processing pipelines are incapable of incorporating whole genome sequencing (WGS). Here, we develop a new pipeline fo
Authors
André Gomes-dos-Santos, Elsa Froufe, John M. Pfeiffer, Nathan Johnson, Chase H. Smith, André M. Machado, L. Filipe C. Castro, Van Tu Do, Akimasa Hattori, Nicole Garrison, Nathan V. Whelan, Ivan N. Bolotov, Ilya V. Vikhrev, Alexander V. Kondakov, Mohamed Ghamizi, Vincent Prié, Arthur E. Bogan, Manuel Lopes Lima