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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 171813

Environmental DNA metabarcoding read numbers and their variability predict species abundance, but weakly in non-dominant species

Metabarcoding of environmental DNA (eDNA) provides more comprehensive, efficient, and non-invasive sampling of biological communities than conventional methods. However, limitations of metabarcoding include taxon-specific biases in amplification and sequencing that distort assessments of community composition. Further, hyper-abundant species may disproportionately affect community composition asse
Authors
James Skelton, Allison Cauvin, Margaret Hunter

Distribution and demography of Coastal Cactus Wrens in Southern California, 2015–19

Surveys and monitoring for the coastal Cactus Wren (Campylorhynchus brunneicapillus) were completed in San Diego County between March 2015 and July 2019. A total of 383 plots were surveyed across 3 genetic clusters (Otay, Lake Jennings, and Sweetwater/Encanto). From 2015 to 2019, 317 plots were surveyed 8 times (twice per year in 2015, 2017–19). Additional plots were added in later years as wrens
Authors
Suellen Lynn, Alexandra Houston, Barbara E. Kus

Mortality associated with extreme heat in Washington State: The historical and projected public health burden

Extreme heat is one of the most important pathways illustrating the connection between climate and human health, and climate change is expected to exacerbate this public health issue. This study first used a case-crossover analysis to characterize the historical (1980–2018) association between summertime heat and non-traumatic mortality in Washington State. A separate analysis was conducted for ea
Authors
Logan Arnold, Mark David Scheuerell, T.B. Isaksen

Simulated global coastal ecosystem responses to a half-century increase in river nitrogen loads

Coastal ecosystems are increasingly threatened by anthropogenic stressors such as harmful algal blooms and hypoxia projected to intensify through the combined effects of eutrophication and warming. As a major terrestrial nitrogen (N) source to the ocean, rivers play a critical role in shaping both coastal and global biogeochemical cycling. Combining an enhanced-resolution (1/4°), global ocean ph
Authors
Xiao Liu, Charles A. Stock, John P. Dunne, Minjin Lee, Elena Shevliakova, Sergey Malyshev, Paul C. D. Milly

Spaceborne InSAR mapping of landslides and subsidence in rapidly deglaciating terrain, Glacier Bay National Park and Preserve and vicinity, Alaska and British Columbia

The Glacier Bay area in southeastern Alaska and British Columbia, encompassing Glacier Bay National Park and Preserve, has experienced rapid glacier retreat since the end of the Little Ice Age in the mid-1800s. The impact that rapid deglaciation has had on the slope stability of valley walls and on the sedimentation of fans and deltas adjacent to fjords and inlets is an ongoing research topic. Usi
Authors
Jinwook Kim, Jeffrey A. Coe, Zhong Lu, Nikita N. Avdievitch, Chad Hults

Microbial endophytes and compost improve plant growth in two contrasting types of hard rock mining waste

The re-vegetation of mining wastes with native plants is a comparatively low-cost solution for mine reclamation. However, re-vegetation fails when extreme pH values, low organic matter, or high concentrations of phytotoxic elements inhibit plant establishment and growth. Our aim was to determine whether the combined addition of municipal waste compost and diazotrophic endophytes (i.e., microorgani
Authors
Courtney Creamer, Mary-Catherine Leewis, Francesca C. Governali, John Freeman, Floyd Gray, Emily G. Wright, Andrea L. Foster

Over the hills and through the farms: Land use and topography influence genetic connectivity of northern leopard frog (Rana pipiens) in the Prairie Pothole Region

ContextAgricultural land-use conversion has fragmented prairie wetland habitats in the Prairie Pothole Region (PPR), an area with one of the most wetland dense regions in the world. This fragmentation can lead to negative consequences for wetland obligate organisms, heightening risk of local extinction and reducing evolutionary potential for populations to adapt to changing environments.Objectives
Authors
Justin M. Waraniak, David M. Mushet, Craig A. Stockwell

Estimating the effect of tidal marsh restoration on housing prices: A hedonic analysis in the Nisqually National Wildlife Refuge, Washington, USA

This study employs the hedonic pricing method and a rich spatial and temporal dataset from two counties in Washington, USA to determine the effect of the 2009 Nisqually Restoration project (NRP) on housing prices in adjacent communities. The NRP restored 308 hectares of wetlands via dike removal in the Billy Frank Jr. Nisqually National Wildlife Refuge (NNWR), leading to improvements in salmon and
Authors
Anthony J. Good, Emily J. Pindilli

Going beyond low flows: Streamflow drought deficit and duration illuminate distinct spatiotemporal drought patterns and trends in the U.S. during the last century

Streamflow drought is a recurring challenge, and understanding spatiotemporal patterns of past droughts is needed to manage future water resources. We examined regional patterns in streamflow drought metrics and compared these metrics to low flow timing and magnitude using long-term daily records for 555 minimally disturbed watersheds. For each streamgage, we calculated streamflow drought duration
Authors
John C. Hammond, Caelan E. Simeone, Jory Seth Hecht, Glenn A. Hodgkins, Melissa Lombard, Gregory J. McCabe, David M. Wolock, Michael Wieczorek, Carolyn G Olson, Todd Caldwell, Robert W. Dudley, Adam N. Price

Methods for evaluating Gap Analysis Project habitat distribution maps with species occurrence data

The National Gap Analysis Project created species habitat distribution models for all terrestrial vertebrates in the United States to support conservation assessments and explore patterns of species richness. Those models link species to specific habitats throughout the range of each species. For most vertebrates, there are not enough occurrence data to drive inductive, range-wide species habitat
Authors
Matthew J. Rubino, Alexa McKerrow, Nathan M. Tarr, Steven G. Williams

Fish diversity reduction and assemblage structure homogenization in lakes: A case study on unselective fishing in China

Unselective fishing involves activities that target the entire assemblage rather than specific fish species, size classes, or trophic levels. This common fishing approach has been in practice for decades in inland waters in China but its implications for biodiversity remain unclear. We addressed this issue by studying fish assemblages in freshwater lakes (five fishing lakes, one reference lake, an
Authors
Han Liu, Yushun Chen, Rodolphe E. Gozlan, Xiao Qu, Wentong Xia, Fei Cheng, Lizhu Wang, Craig Paukert, Julian D. Olden, Songguang Xie

Diminishing Arctic lakes

The Arctic is home to the largest surface water fraction of any terrestrial biome, containing thousands of low-lying lakes. Now, it appears that some Arctic lakes are drying due to rising air temperatures and autumn rains, causing permafrost to thaw and water bodies to drain.
Authors
Rebecca A Finger-Higgens
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