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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. **Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 3984

DNA mixtures for ecology

Mixtures of DNA from multiple contributors present a novel opportunity to count individuals to inform fish and wildlife ecology.We apply a likelihood-based framework to estimate the number of contributors to a DNA mixture for ecological applications. We then assess the performance of DNA mixture estimation through a combination of simulation analyses, laboratory testing, and a field trial to estim
Authors
Suresh Sethi, Wesley Larson, Keith Turnquist, Daniel A. Isermann

Modeling golden eagle‐vehicle collisions to design mitigation strategies

The incidental take of golden eagles (Aquila chrysaetos) as a result of wind energy development requires some form of compensatory mitigation. Although several options have been proposed, only one has been formerly accepted and implemented, and the lack of options can limit the permit process for wind facilities. We developed a model to estimate numbers of golden eagles that die when struck by veh
Authors
Eric V. Lonsdorf, Carol A. Sanders-Reed, Clint W. Boal, Taber Allison

Evaluating relationships between native fishes and habitat in streams affected by oil and natural gas development

Oil and natural gas (ONG) development can affect aquatic ecosystems through water contamination, water withdrawals and disturbance of soil and vegetation (surface disturbance) from infrastructure development. Research on how these potential sources of watershed and aquatic ecosystem impairment can affect fish assemblages is limited. Fish–habitat relationships were evaluated across stream sites exp
Authors
Carlin Girard, Annika W. Walters

An individual-based model for predicting dynamics of a newly established Mexican wolf (Canis lupus baileyi) population—Final report

Project SummaryThe Mexican wolf recovery team proposed to establish other populations of Mexican wolves (Canis lupus baileyi) in the Southwest (U.S. Fish and Wildlife Service, 1982). We were tasked to conduct an extensive simulation modeling exercise to determine release strategies (in conjunction with management actions) that best predict establishment of a new Mexican wolf population. Our object
Authors
Jay V. Gedir, James W. Cain

A review of Bayesian belief network models as decision-support tools for wetland conservation: Are water birds potential umbrella taxa?

Creative approaches to identifying umbrella species hold promise for devising effective surrogates of ecological communities or ecosystems. However, mechanistic niche models that predict range or habitat overlap among species may yet lack development. We reviewed literature on taxon-centered Bayesian belief network (BBN) models to explore a novel approach to identify umbrella taxa identifying taxo
Authors
Maggie P. MacPherson, Elisabeth B. Webb, Andy Raedeke, Doreen C. Mengel, Frank Nelson

Efficiency of sampling sunfishes using snorkeling in clear, warmwater streams of the south-central United States

The continued evaluation of fish-sampling gears and methods is essential to identify their applicability across environmental conditions and among species. Although limited by visibility, snorkeling has potential advantages relative to other fish-sampling gears in wadeable streams (e.g., minimally intrusive, cost effective, and appropriate in deeper areas). Clear water is common to warm-water stre
Authors
Robert Mollenhauer, Shannon K. Brewer

Demographic consequences of conservation reserve program grasslands for lesser prairie‐chickens

Knowledge of landscape and regional circumstances where conservation programs are successful on working lands in agricultural production are needed. Converting marginal croplands to grasslands using conservation programs such as the United States Department of Agriculture Conservation Reserve Program (CRP) should be beneficial for many grassland‐obligate wildlife species; however, addition of CRP
Authors
David A. Haukos

An interferometric synthetic aperture radar (InSAR) habitat suitability model to identify overwinter conditions for coregonine whitefishes in Arctic lagoons

Lagoons provide critical habitats for many fishes, including coregonine whitefishes, which are a mainstay in many subsistence fisheries of rural communities in Arctic Alaska. Despite their importance, little is known about the overwintering habits of whitefishes in Arctic Alaska due to the challenges associated with sampling during winter. We developed a habitat suitability (HS) model to understan
Authors
Marguerite Tibbles, Jeffrey A. Falke, Andrew R. Mahoney, Martin D. Robards, Andrew C. Seitz

An evaluation of three fish surveys in the San Francisco Estuary, 1995–2015

Resource managers rely on long-term monitoring surveys conducted in the San Francisco Estuary to evaluate the status and trends of resident fish populations in this important region. These surveys are potentially confounded because of the incomplete detection of individuals and species, the magnitude of which is often related to the same factors that affect fish populations. We used multistate occ
Authors
James Peterson, Miguel F. Barajas

Nest tree use by Southern flying squirrels in fragmented midwestern landscapes

Southern flying squirrels (Glaucomys volans; SFS) nest in naturally formed cavities in snags and hardwoods found in mature, oak (Quercus spp.)–hickory (Carya spp.) forests. Intensive forest fragmentation of the Midwest United States limits the number of available nesting trees. We quantified annual nest‐site selection patterns by southern flying squirrels across fragmented landscapes of west‐centr
Authors
James S. Zweep, Christopher N. Jacques, Sean E. Jenkins, Robert W. Klaver, Shelli A. Dubay

Posthatch development of otoliths and daily ring genesis in age-0 Spotted Gars

Gars (Lepisosteidae) are increasingly being managed as top-level predators that are important to overall ecosystem health. Given the paucity of information on early life history for many species, additional early life history data would aid in gar conservation and management. Daily rings in otoliths are useful for determining many early life history parameters, such as growth rates and the date of
Authors
James M. Long, R. A. Snow

Piscivore diet shifts and trophic level change after Alewife establishment in Lake Champlain

Invasions and deliberate introductions of new prey species are likely to affect prey choice and trophic level of resident predators. Rainbow Smelt (Osmerus mordax) and Alewife (Alosa pseudoharengus) are common prey fish species in lakes throughout North America either as native or non‐native species. The establishment of Alewife in the 2000s in a lake with a native Rainbow Smelt population (Lake C
Authors
Paul W. Simonin, Lars G. Rudstam, Donna L. Parrish, Bernard Pientka, Patrick J. Sullivan