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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. **Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 3984

Evidence from data storage tags for the presence of lunar and semilunar behavioral cycles in spawning Atlantic cod

Understanding the environmental processes determining the timing and success of reproduction is of critical importance to developing effective management strategies of marine fishes. Unfortunately it has proven difficult to comprehensively study the reproductive behavior of broadcast-spawning fishes. The use of electronic data storage tags (DSTs) has the potential to provide insights into the beha
Authors
Timothy B. Grabowski, Bruce J. McAdam, Vilhjalmur Thorsteinsson, Gudrún Marteinsdóttir

Deployment of paired pushnets from jet-propelled kayaks to sample ichthyoplankton

Accessing and effectively sampling the off-channel habitats that are considered crucial for early life stages of freshwater fishes constitute a difficult challenge when common ichthyoplankton survey methods, such as push nets, are used. We describe a new method of deploying push nets from jet-propelled kayaks to enable the sampling of previously inaccessible off-channel habitats. The described rig
Authors
Matthew R. Acre, Timothy B. Grabowski

Baseline blood Pb levels of black-necked stilts on the upper Texas coast

There are no known biological requirements for lead (Pb), and elevated Pb levels in birds can cause a variety of sub-lethal effects and mortality. Historic and current levels of Pb in mottled ducks (Anas fulvigula) suggest that environmental sources of Pb remain available on the upper Texas coast. Because of potential risks of Pb exposure among coexisting marsh birds, black-necked stilt (Himantopu
Authors
Thomas V. Riecke, Warren C. Conway, David A. Haukos, Jena A. Moon, Christopher E. Comer

A guide to Bayesian model selection for ecologists

The steady upward trend in the use of model selection and Bayesian methods in ecological research has made it clear that both approaches to inference are important for modern analysis of models and data. However, in teaching Bayesian methods and in working with our research colleagues, we have noticed a general dissatisfaction with the available literature on Bayesian model selection and multimode
Authors
Mevin Hooten, N.T. Hobbs

Using spatiotemporal statistical models to estimate animal abundance and infer ecological dynamics from survey counts

Ecologists often fit models to survey data to estimate and explain variation in animal abundance. Such models typically require that animal density remains constant across the landscape where sampling is being conducted, a potentially problematic assumption for animals inhabiting dynamic landscapes or otherwise exhibiting considerable spatiotemporal variation in density. We review several concepts
Authors
Paul B. Conn, Devin S. Johnson, Jay M. Ver Hoef, Mevin Hooten, Joshua M. London, Peter L. Boveng

On the existence of maximum likelihood estimates for presence-only data

Presence-only data can be used to determine resource selection and estimate a species’ distribution. Maximum likelihood is a common parameter estimation method used for species distribution models. Maximum likelihood estimates, however, do not always exist for a commonly used species distribution model – the Poisson point process. We demonstrate the issue with conventional maximum likelihood math
Authors
Trevor J. Hefley, Mevin Hooten

Forecasting the effects of fertility control on overabundant ungulates: White-tailed deer in the National Capital Region

Overabundant populations of ungulates have caused environmental degradation and loss of biological diversity in ecosystems throughout the world. Culling or regulated harvest is often used to control overabundant species. These methods are difficult to implement in national parks, other types of conservation reserves, or in residential areas where public hunting may be forbidden by policy. As a res
Authors
Ann M. Raiho, Mevin Hooten, Scott Bates, N. Thompson Hobbs

Evaluating multi-level models to test occupancy state responses of Plethodontid salamanders

Plethodontid salamanders are diverse and widely distributed taxa and play critical roles in ecosystem processes. Due to salamander use of structurally complex habitats, and because only a portion of a population is available for sampling, evaluation of sampling designs and estimators is critical to provide strong inference about Plethodontid ecology and responses to conservation and management act
Authors
Andrew J. Kroll, Tiffany S. Garcia, Jay E. Jones, Katie Dugger, Blake Murden, Josh Johnson, Summer Peerman, Ben Brintz, Michael Rochelle

Epizootiology of cranial abscess disease in white-tailed deer (Odocoileus virginianus) of Georgia, USA

Intracranial abscess disease is a cause of natural mortality for mature male white-tailed deer (Odocoileus virginianus). Most cases of abscesses are associated with bacterial infection byTrueperella (Arcanobacterium) pyogenes, but a complete understanding of the epidemiology of this disease is lacking. We quantified the effects of individual characteristics, site-specific herd demographics, land c
Authors
Bradley S. Cohen, Emily H. Belser, Charlie H. Killmaster, John W. Bowers, Brian J. Irwin, Michael J. Yabsley, Karl V. Miller

A predictive model to inform adaptive management of double-crested cormorants and fisheries in Michigan

The proliferation of double-crested cormorants (DCCOs; Phalacrocorax auritus) in North America has raised concerns over their potential negative impacts on game, cultured and forage fishes, island and terrestrial resources, and other colonial water birds, leading to increased public demands to reduce their abundance. By combining fish surplus production and bird functional feeding response models,
Authors
Iyob Tsehaye, Michael L. Jones, Brian J. Irwin, David G. Fielder, James E. Breck, David R. Luukkonen

Effects of climate and plant phenology on recruitment of moose at the southern extent of their range

Climate plays a fundamental role in limiting the range of a species, is a key factor in the dynamics of large herbivores, and is thought to be involved in declines of moose populations in recent decades. We examined effects of climate and growing-season phenology on recruitment (8–9 months old) of young Shiras moose (Alces alces shirasi) over three decades, from 18 herds, across a large geographic
Authors
Kevin L. Monteith, Robert W. Klaver, Kent Hersey, A. Andrew Holland, Timothy P. Thomas, Matthew Kauffman

Evidence for skipped spawning in a potamodromous cyprinid, humpback chub (Gila cypha), with implications for demographic parameter estimates

Our findings reveal evidence for skipped spawning in a potamodromous cyprinid, humpback chub (HBC; Gila cypha  ). Using closed robust design mark-recapture models, we found, on average, spawning HBC transition to the skipped spawning state () with a probability of 0.45 (95% CRI (i.e. credible interval): 0.10, 0.80) and skipped spawners remain in the skipped spawning state () with a probability of
Authors
Kristen Nicole Pearson, William L. Kendall, Dana L. Winkelman, William R. Persons