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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. **Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 3984

A regional neural network model for predicting mean daily river water temperature

Water temperature is a fundamental property of river habitat and often a key aspect of river resource management, but measurements to characterize thermal regimes are not available for most streams and rivers. As such, we developed an artificial neural network (ANN) ensemble model to predict mean daily water temperature in 197,402 individual stream reaches during the warm season (May–October) thro
Authors
Tyler Wagner, Jefferson Tyrell DeWeber

Spatial and temporal Brook Trout density dynamics: Implications for conservation, management, and monitoring

Many potential stressors to aquatic environments operate over large spatial scales, prompting the need to assess and monitor both site-specific and regional dynamics of fish populations. We used hierarchical Bayesian models to evaluate the spatial and temporal variability in density and capture probability of age-1 and older Brook Trout Salvelinus fontinalis from three-pass removal data collected
Authors
Tyler Wagner, Jefferson T. Deweber, Jason Detar, David Kristine, John A. Sweka

Modeling spatially-varying landscape change points in species occurrence thresholds

Predicting species distributions at scales of regions to continents is often necessary, as large-scale phenomena influence the distributions of spatially structured populations. Land use and land cover are important large-scale drivers of species distributions, and landscapes are known to create species occurrence thresholds, where small changes in a landscape characteristic results in abrupt chan
Authors
Tyler Wagner, Stephen R. Midway

The importance of context dependency for understanding the effects of low flow events on fish

The natural hydrology of streams and rivers has been extensively altered by dam construction, water diversion, and climate change. An increased frequency of low-flow events will affect fish by changing habitat availability, resource availability, and reproductive cues. I reviewed the literature to characterize the approaches taken to assess low-flow events and fish, the main effects of low-flow ev
Authors
Annika W. Walters

Effects of invasive European bird cherry (Prunus padus) on leaf litter processing by aquatic invertebrate shredder communities in urban Alaskan streams

European bird cherry (Prunus padus) (EBC) is an invasive ornamental tree that is spreading rapidly in riparian forests of urban Alaska. To determine how the spread of EBC affects leaf litter processing by aquatic invertebrate shredders, we conducted complementary leaf pack experiments in two streams located in Anchorage, Alaska. The first experiment contrasted invasive EBC with three native tree s
Authors
David A. Roon, Mark S. Wipfli, Tricia L. Wurtz

Establishing endangered species recovery criteria using predictive simulation modeling

Listing a species under the Endangered Species Act (ESA) and developing a recovery plan requires U.S. Fish and Wildlife Service to establish specific and measurable criteria for delisting. Generally, species are listed because they face (or are perceived to face) elevated risk of extinction due to issues such as habitat loss, invasive species, or other factors. Recovery plans identify recovery cri
Authors
Conor P. McGowan, Daniel H. Catlin, Terry L. Shaffer, Cheri L. Gratto-Trevor, Carol Aron

Condition Factor Analysis for the American alligator (Alligator mississippiensis)

No abstract available.
Authors
Christa L. Zweig, Kenneth G. Rice, H. Franklin Percival, Frank J. Mazzotti

Social-ecological resilience and law in the Platte River Basin

Efficiency and resistance to rapid change are hallmarks of both the judicial and legislative branches of the United States government. These defining characteristics, while bringing stability and predictability, pose challenges when it comes to managing dynamic natural systems. As our understanding of ecosystems improves, we must devise ways to account for the non-linearities and uncertainties rif
Authors
Hannah E. Birge, Craig R. Allen, Robin Craig, Ahjond S. Garmestani, Joseph A. Hamm, Christina Babbitt, Kristine T. Nemec, Edella Schlager

GIS-based rapid-assessment of bighead carp Hypophthalmichthys nobilis (Richardson, 1845) suitability in reservoirs

Broad-scale niche models are good for examining the potential for invasive species occurrences, but can fall short in providing managers with site-specific locations for monitoring. Using Oklahoma as an example, where invasive bighead carp (Hypophthalmichthys nobilis) are established in certain reservoirs, but predicted to be widely distributed based on broad-scale niche models, we cast bighead ca
Authors
James M. Long, Yu Liang, Daniel E. Shoup, Andrew R. Dzialowski, Joseph R. Bidwell

Golden alga presence and abundance are inversely related to salinity in a high-salinity river ecosystem, Pecos River, USA

Prymnesium parvum (golden alga, GA) is a toxigenic harmful alga native to marine ecosystems that has also affected brackish inland waters. The first toxic bloom of GA in the western hemisphere occurred in the Pecos River, one of the saltiest rivers in North America. Environmental factors (water quality) associated with GA occurrence in this basin, however, have not been examined. Water quality and
Authors
Natascha M.D. Israël, Matthew M. VanLandeghem, Shawn Denny, John Ingle, Reynaldo Patiño

Best practices for continuous monitoring of temperature and flow in wadeable streams

The United States Environmental Protection Agency (U.S. EPA) is working with its regional offices, states, tribes, river basin commissions and other entities to establish Regional Monitoring Networks (RMNs) for freshwater wadeable streams. To the extent possible, uninterrupted, biological, temperature and hydrologic data will be collected on an ongoing basis at RMN sites, which are primarily locat
Authors
Jen Stamp, Anna I. Hamilton, Michelle Craddock, Laila Parker, Allison H. Roy, Daniel J. Isaak, Zachary Holden, Margaret Passmore, Britta Bierwagen

Factors affecting fat content in mottled ducks on the Upper Texas Gulf Coast

Body condition, or an individual's ability to address metabolic needs, is an important measure of organism health. For waterfowl, body condition, usually some measure of fat, provides a useful proxy for assessing energy budgets during different life history periods and potentially is a measure of response to ecosystem changes. The mottled duck (Anas fulvigula) is relatively poorly studied in respe
Authors
Brian Kearns, David A. Haukos, Patrick Walther, Warren C. Conway