Microbial community assembly and metabolic function during mammalian corpse decomposition
Vertebrate corpse decomposition provides an important stage in nutrient cycling in most terrestrial habitats, yet microbially mediated processes are poorly understood. Here we combine deep microbial community characterization, community-level metabolic reconstruction, and soil biogeochemical assessment to understand the principles governing microbial community assembly during decomposition of mouse and human corpses on different soil substrates. We find a suite of bacterial and fungal groups that contribute to nitrogen cycling and a reproducible network of decomposers that emerge on predictable time scales. Our results show that this decomposer community is derived primarily from bulk soil, but key decomposers are ubiquitous in low abundance. Soil type was not a dominant factor driving community development, and the process of decomposition is sufficiently reproducible to offer new opportunities for forensic investigations.
Citation Information
Publication Year | 2016 |
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Title | Microbial community assembly and metabolic function during mammalian corpse decomposition |
DOI | 10.1126/science.aad2646 |
Authors | Jessica L Metcalf, Zhenjiang Zech Xu, Sophie Weiss, Simon Lax, Will Van Treuren, Embriette R. Hyde, Se Jin Song, Amnon Amir, Peter Larsen, Naseer Sangwan, Daniel Haarmann, Greg C Humphrey, Gail Ackermann, Luke R Thompson, Christian Lauber, Alexander Bibat, Catherine Nicholas, Matthew J Gebert, Joseph F Petrosino, Sasha C. Reed, Jack A Gilbert, Aaron M Lynne, Sibyl R Bucheli, David O Carter, Rob Knight |
Publication Type | Article |
Publication Subtype | Journal Article |
Series Title | Science |
Index ID | 70168433 |
Record Source | USGS Publications Warehouse |
USGS Organization | Southwest Biological Science Center |