Publications
Publications from USGS science centers throughout the Southeast Region.
Filter Total Items: 9967
A guidebook to spatial datasets for conservation planning under climate change in the Pacific Northwest
This guidebook provides user-friendly overviews of a variety of spatial datasets relevant to conservation and management of natural resources in the face of climate change in the Pacific Northwest, United States. Each guidebook chapter was created using a standardized template to summarize a spatial dataset or a group of closely related datasets. Datasets were selected according to standardized cr
Authors
Jennifer M. Cartwright, Travis Belote, Kyle W. Blasch, Steve Campbell, Jeanne C. Chambers, Raymond J. Davis, Solomon Dobrowski, Jason B. Dunham, Diana Gergel, Daniel Isaak, Kristin Jaeger, Meade Krosby, Jesse Langdon, Joshua J. Lawler, Caitlin E. Littlefield, Charles H. Luce, Jeremy D Maestas, Anthony Martinez, Arjan J.H. Meddens, Julia Michalak, Sean A. Parks, Wendy Peterman, Ken Popper, Chris Ringo, Roy Sando, Michael Schindel, Diana Stralberg, David M. Theobald, Nathan Walker, Chad Wilsey, Zhiqiang Yang, Andrew Yost
Thiamine concentrations in lake trout and Atlantic salmon eggs during 14 years following the invasion of alewife in Lake Champlain
Thiamine (vitamin B1) deficiency in Great Lakes salmonines has been linked to consumption of alewife Alosa pseudoharengus. Thiamine deficiency has been recognized as a possible impediment to lake trout Salvelinus namaycush recruitment in the Great Lakes and Atlantic salmon Salmo salar recruitment in the Finger Lakes and Baltic Sea. Alewife invaded Lake Champlain in 2003 which provided an opportuni
Authors
Bret J. Ladago, Matthew H. Futia, William R. Ardren, Dale C. Honeyfield, Kevin P. Kelsey, Carrie L. Kozel, Stephen Riley, Jacques Rinchard, Donald E. Tillitt, James L. Zajicek, J. Ellen Marsden
Monitoring and real-time modeling of Escherichia coli bacteria for the Chattahoochee River, Chattahoochee River National Recreation Area, Georgia, 2000–2019
The Chattahoochee River National Recreation Area (CRNRA) is a National Park Service unit/park with 48 miles of urban waterway in the Atlanta metropolitan area. The Chattahoochee River within the CRNRA is a popular place for water-based recreation but is known to periodically experience elevated levels of fecal-coliform bacteria associated with warm-blooded animals that can result in a variety of p
Authors
Brent T. Aulenbach, Anna M. McKee
Influence of soil microbiota on Taxodium distichum seedling performance during extreme flooding events
Plant associations with soil microbiota can modulate tree seedling growth and survival via mutualistic or antagonistic interactions. It is uncertain, however, whether soil microbiota influence seedling growth of coastal trees when exposed to extreme flooding regimes. We evaluated the role of soil microbes in promoting baldcypress (Taxodium distichum) seedling performance under different inundation
Authors
Lorena Torres-Martínez, Mareli Sánchez-Julia, Elizabeth Kimbrough, Trey Hendrix, Miranda Hendrix, Richard H. Day, Ken W. Krauss, Sunshine A Van Bael
The field trip that changed the course of my career
After gobbling down a breakfast of sliced papaya, scrambled eggs, refried beans, and soft flour tacos, we gathered our gear and loaded it into the red zodiac that the station manager had assigned to us. My colleagues and I were headed to a pair of islands off the coast of Belize called Twin Cays, occupied by a unique group of tropical plants and animals adapted to a wet and saline habitat.
Our r
Authors
Karen L. McKee
The utility of zooarchaeological data to guide listing efforts for an imperiled mussel species (Bivalvia: Unionidae: Pleurobema riddellii)
The status of species in freshwater systems shift over time due to natural and anthropogenic causes. Determining the magnitude and cause of these shifts requires a long-term perspective. This process is complicated when there are also questions about the taxonomic validity of a species. Addressing these issues is important because both can undermine conservation and management efforts if incorrect
Authors
Charles R. Randklev, Steve Wolverton, Nathan A. Johnson, Chase H. Smith, Traci DuBose, Clint Robertson, Julian Conley
A new species of freshwater mussel in the genus Popenaias Frierson, 1927, from the Gulf coastal rivers of central Mexico (Bivalvia: Unionida: Unionidae) with comments on the genus
The Gulf coastal drainages of central Mexico are a faunal transition zone between North and South America and harbor a unique assemblage of freshwater mussels (Bivalvia: Unionida). However, little information is available regarding the taxonomy, distribution, and evolutionary history of the Mexican mussel fauna due to limited sampling over the last 100 years. To address these knowledge gaps, we ev
Authors
Kentaro Inoue, Kevin S. Cummings, Jeremy S. Tiemann, Thomas D. Miller, Nathan Johnson, Chase H. Smith, Charles R. Randklev
Salinity, water level, and forest structure contribute to baldcypress (Taxodium distichum) rhizosphere and endosphere community structure
As rising sea levels alter coastal ecosystems, there is a pressing need to examine the effects of saltwater intrusion on coastal communities. Using 16S Illumina profiling, we characterized the communities of baldcypress tree (Taxodium distichum) root endosphere and rhizosphere soil bacteria. Our study utilized established sites along salinity and flooding gradients in the United States of Georgia,
Authors
Candice Y Lumibao, Elizabeth Kimbrough, Steven Formel, Richard Day, Andrew From, William H. Conner, Ken Krauss, Sunshine A Van Bael
A comparative phylogeographic approach to facilitate recovery of an imperiled freshwater mussel (Bivalvia: Unionida: Potamilus inflatus)
North American freshwaters are among the world’s most threatened ecosystems, and freshwater mussels are among the most imperiled inhabiting these systems. A critical aspect of conservation biology is delineating patterns of genetic diversity, which can be difficult when a taxon has been extirpated from a significant portion of its historical range. In such cases, evaluating conservation and recove
Authors
Chase H. Smith, Nathan A. Johnson
Wastewater-based epidemiology pilot study to examine drug use in the Western United States
The extent of prescription and illicit drug abuse in geographically isolated rural and micropolitan communities in the intermountain western United States (US) has not been well tracked. The goal of this pilot study was to accurately measure drug dose consumption rates (DCR) between two select populations, normalize the data and compare the DCRs to similar communities. To learn about patterns of d
Authors
Nicholas Bishop, Tammy Jones-Lepp, Miranda Margetts, Jordan Sykes, David Alvarez, Deborah Keil
Comparative phylogenomics reveal complex evolution of life history strategies in a clade of bivalves with parasitic larvae (Bivalvia: Unionoida: Ambleminae)
Freshwater mussels are a species‐rich group with biodiversity patterns strongly shaped by a life history strategy that includes an obligate parasitic larval stage. In this study, we set out to reconstruct the life history evolution and systematics in a clade of freshwater mussels adapted to parasitizing a molluscivorous host fish. Anchored hybrid enrichment and ancestral character reconstruction r
Authors
Chase H. Smith, John M. Pfeiffer, Nathan A. Johnson