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Explore scientific publications from the USGS St. Petersburg Coastal and Marine Science Center.

Filter Total Items: 919

USGS St. Petersburg Coastal and Marine Science Center

Extreme storms, sea-level rise, and the health of marine communities are some of the major societal and environmental issues impacting our Nation's marine and coastal realm. The U.S. Geological Survey (USGS) in St. Petersburg, Fla., investigates processes related to these ecosystems and the societal implications of natural hazards and resource sustainability. As one of three centers nationwide con

Integrating science and resource management in Tampa Bay, Florida

Tampa Bay is recognized internationally for its remarkable progress towards recovery since it was pronounced "dead" in the late 1970s. Due to significant efforts by local governments, industries and private citizens throughout the watershed, water clarity in Tampa Bay is now equal to what it was in 1950, when population in the watershed was less than one-quarter of what it is today. Seagrass exten
Authors
Kimberly K. Yates, Holly Greening, Gerold Morrison

Reactive-transport modeling of iron diagenesis and associated organic carbon remineralization in a Florida (USA) subterranean estuary

Iron oxides are important terminal electron acceptors for organic carbon (OC) remineralization in subterranean estuaries, particularly where oxygen and nitrate concentrations are low. In Indian River Lagoon, Florida, USA, terrestrial Fe-oxides dissolve at the seaward edge of the seepage face and flow upward into overlying marine sediments where they precipitate as Fe-sulfides. The dissolved Fe con
Authors
Moutusi Roy, Jonathan B. Martin, Christopher G. Smith, Jaye E. Cable

Microbial ecology of deep-water mid-Atlantic canyons

The research described in this fact sheet will be conducted from 2012 to 2014 as part of the U.S. Geological Survey's DISCOVRE (DIversity, Systematics, and COnnectivity of Vulnerable Reef Ecosystems) Program. This integrated, multidisciplinary effort will be investigating a variety of topics related to unique and fragile deep-sea ecosystems from the microscopic level to the ecosystem level. One go
Authors
Christina A. Kellogg

Methods for processing and imaging marsh foraminifera

This study is part of a larger U.S. Geological Survey (USGS) project to characterize the physical conditions of wetlands in southwestern Louisiana. Within these wetlands, groups of benthic foraminifera-shelled amoeboid protists living near or on the sea floor-can be used as agents to measure land subsidence, relative sea-level rise, and storm impact. In the Mississippi River Delta region, intertid
Authors
Chandra A. Dreher, James G. Flocks

Prediction and assimilation of surf-zone processes using a Bayesian network: Part I: Forward models

Prediction of coastal processes, including waves, currents, and sediment transport, can be obtained from a variety of detailed geophysical-process models with many simulations showing significant skill. This capability supports a wide range of research and applied efforts that can benefit from accurate numerical predictions. However, the predictions are only as accurate as the data used to drive t
Authors
Nathaniel G. Plant, K. Todd Holland

Prediction and assimilation of surf-zone processes using a Bayesian network: Part II: Inverse models

A Bayesian network model has been developed to simulate a relatively simple problem of wave propagation in the surf zone (detailed in Part I). Here, we demonstrate that this Bayesian model can provide both inverse modeling and data-assimilation solutions for predicting offshore wave heights and depth estimates given limited wave-height and depth information from an onshore location. The inverse me
Authors
Nathaniel G. Plant, K. Todd Holland

Characterization of sediments from the Gulf of Mexico and Atlantic shorelines, Texas to Florida

In response to the Deepwater Horizon oil spill, sediment samples that were projected to have a high probability of being impacted by the oil were collected from shoreline zones of Texas, Louisiana, Mississippi, Alabama, and Florida. Sixty-one sites were sampled and analyzed for hydraulic conductivity, porosity, and grain-size distribution. The objective of this effort was to provide a set of basel
Authors
John T. Lisle, Norris N. Comer

A survey of microbial community diversity in marine sediments impacted by petroleum hydrocarbons from the Gulf of Mexico and Atlantic shorelines, Texas to Florida

Microbial community genomic DNA was extracted from sediment samples collected along the Gulf of Mexico and Atlantic coasts from Texas to Florida. Sample sites were identified as being ecologically sensitive and (or) as having high potential of being impacted by Macondo-1 (M-1) well oil from the Deepwater Horizon blowout. The diversity within the microbial communities associated with the collected
Authors
John T. Lisle, Sarah H. Stellick

A survey of alterations in microbial community diversity in marine sediments in response to oil from the Deepwater Horizon spill: Northern Gulf of Mexico shoreline, Texas to Florida

Microbial community genomic DNA was extracted from sediment samples collected from the northern Gulf of Mexico (NGOM) coast. These samples had a high probability of being impacted by Macondo-1 (M-1) well oil from the Deepwater Horizon (DWH) drilling site. The hypothesis for this project was that presence of M-1 oil in coastal sediments would significantly alter the diversity within the microbial c
Authors
John T. Lisle

The use of epifluorescent microscopy and quantitative polymerase chain reaction to determine the presence/absence and identification of microorganisms associated with domestic and foreign wallboard samples

Epifluorescent microscopy and quantitative polymerase chain reaction (qPCR) were utilized to determine the presence, concentration and identification of bacteria, and more specifically sulfate reducing bacteria (SRB) in subsamples of Chinese and North American wallboard, and wallboard-mine rock. Bacteria were visible in most subsamples, which included wallboard-lining paper from each side of the w
Authors
Dale W. Griffin

Microhabitat associations of a semi-terrestrial fish, Kryptolebias marmoratus (Poey 1880) in a mosquito-ditched mangrove forest, west-central Florida

Mangrove rivulus (Kryptolebias marmoratus) is one of the few species of fish that is semi-terrestrial and able to use exposed intertidal and potentially supratidal habitats for prolonged periods of time. Based on previous work demonstrating frequent use of subterranean crab burrows as well as damp leaf litter and logs, we examined the microhabitat associations of rivulus in a mosquito-ditched mang
Authors
Travis M. Richards, Justin M. Krebs, Carole C. McIvor